Sorex fumeus (smoky shrew): 130043718
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Entry
130043718 CDS
T10594
Symbol
CDH1
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04015
Rap1 signaling pathway
sfum04371
Apelin signaling pathway
sfum04390
Hippo signaling pathway
sfum04514
Cell adhesion molecules
sfum04520
Adherens junction
sfum05100
Bacterial invasion of epithelial cells
sfum05200
Pathways in cancer
sfum05213
Endometrial cancer
sfum05216
Thyroid cancer
sfum05218
Melanoma
sfum05219
Bladder cancer
sfum05226
Gastric cancer
Brite
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130043718 (CDH1)
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Major cadherins
130043718 (CDH1)
CD molecules [BR:
sfum04090
]
Proteins
130043718 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130043718
NCBI-ProteinID:
XP_055992109
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MVSASARVRPPANQRGGGGASAAHLAAAAALSDSVVSGTAEAVPASLCNRGRALSDPPRP
KPTPPTLRPAMGPRCRRLSALLGLLLLQVPSRLCGEPNPCRPGFGAESYTFTVSRRHLER
GRVLGRVTFEGCTGLPRTVYNAEDTRFKVDTNGVVSVKRPVRLHNPELSFLVHGWDASFQ
KHSARVTLKLSERQRHRRHHHHLHRVLALFPFPLQESVAGSQPEVLTFRSLSHGLRRQKR
DWVIPPISCSENEKGPFPKDLVQIKSNRDKETKVFYSITGQGADTPPLGVFVIERETGWL
RVTQPLDRENIANYTLLSHAVSSNGIAIEDPMEIVIKVTDQNDNKPQFIKQVFEGSVVEG
VLPGTSVMEISATDADDPATYNAAIGYSILSQDPPQPEPKMFSVDKVSGVIRVTTPGLDR
ETIPTYTLVVQAADLEGEGLITTATAVITVLDSNDNAPVFNPTTYKGTVPENEVDAKITV
LKVTDADAPNTPAWRAVYTITNDKDEQFFVTTDPITNDGILKTAKELDYEAKQQYILYVV
VTNEAPFDVQLTTSTATVTVDVEDVNEAPIFVPPEKTVSVPEDLAVQTEIGIYTAREPDT
FMTQKITYRIWRDPADWLGINPETGAIYCLAEMDRENTEYVKNSTYEALIIATDDGSPVA
TGTGTLLLHLIDVNDNAPEPDPRRLDFCQRDPHPQVINIIDRDLPPNTEPFTAELTHGAS
VNWTIQFTDEEKRNSLLLKPAKHLEVGDYKVNLKLADQQKKDQVTTLDVFVCDCEGNNNC
KRLSPYVEAGLQVPAILGILGGILALLILLLLLLLFIRRRTVVKEPLLPPEDDTRDNVYY
YDEEGGGEEDQDFDLSQLHRGLDARPEVTRNDVAPTHLTMPQYRPRPANPDEIGNFIDEN
LKAADTDPTAPPYDSLLVFDYEGSGSDAASLSSLNSSDSDQDQDYDYLNEWGNRFKKLAD
MYGGGEDD
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagcctcggccagggtgcgccccccagccaatcagcggggcgggggcggagcc
tcggcggctcacctggcggcggcggcggcgctgtcggactcagtggtgtccggaaccgcc
gaagccgtacctgcgagtctctgcaatcgcggccgcgcgctgtccgacccgccgcgaccc
aagcccaccccaccgaccctccggcccgccatggggcctcggtgccgccgcctttccgcg
ctcttggggctgctgctcctgcaggtcccatcgcggctgtgcggggagcccaatccctgt
cgtcccggcttcggcgccgagagctacacgttcaccgtgtcccggcgacacctggagagg
ggccgcgtcctgggccgagtgaccttcgagggatgtactggtctgccgaggacggtctat
aacgcagaggacacccgcttcaaggtggacacgaacggcgtggtctcggtcaagcggccc
gtgcggctgcataaccccgagctgagcttcctggtgcacggctgggacgcctccttccag
aagcattccgccagggtcaccctgaagctctcagaacgccagcgccaccgccgccaccac
caccacctccaccgcgttcttgctctttttcccttccccttgcaggagtctgtcgctgga
tcccagccggaagtgctcacattccgcagcttgagccatggtctccgcaggcagaagaga
gactgggtcatccctcccatcagctgctctgaaaacgagaaaggcccatttcctaaagat
ctggtgcagatcaaatctaacagggacaaagagactaaagttttctacagcatcaccggg
cagggagcagacacgccccctctcggcgtgtttgtcattgagcgagagacaggctggctg
agggtgacccagcccctggatcgggagaacatcgccaattacacgctcttatctcacgcc
gtgtcttccaacgggatcgccatcgaggaccccatggagattgtgatcaaggtgacagat
cagaacgacaacaagcctcagttcatcaagcaggtcttcgagggctctgttgtagaaggg
gttcttccaggaacctccgtcatggagatctcggccacggacgctgacgacccggccacc
tacaatgctgccatcggctatagcatcctcagccaggaccccccgcagcccgagcccaag
atgttctccgtggacaaagtctcgggggtcatcagagtgaccacgcctggactggatcgg
gagactatccccacttacacgctggtggtgcaggctgctgacttggagggggaaggcttg
attacgacggccacagctgtgatcactgtcctggacagcaacgacaacgcccccgtgttc
aaccctaccacgtacaagggcacagtgcctgagaatgaagttgatgccaagatcaccgtc
ctcaaagtgactgacgctgatgcccccaataccccggcgtggagggctgtgtacaccatc
acaaatgataaagacgagcaattttttgtcaccacagaccccataaccaatgatggcatt
ctgaaaacggctaaggaattggattatgaggccaagcagcagtatattctctacgtggta
gtgactaacgaagccccctttgacgtccagctgaccacctccacggccaccgtaactgtg
gacgtggaagatgtaaatgaggcccccatctttgtgcctcctgaaaagactgtgtctgtg
ccagaagacttagccgtgcagacagaaatcggaatctacacggcccgggaaccagacact
ttcatgactcagaagataacgtatcgaatttggagagaccctgcggattggctggggatt
aaccctgaaactggtgccatttattgtctggcagagatggacagagagaacacagagtac
gtgaagaatagcacctacgaggccctcatcatcgccacggatgacgggtccccggttgct
actggaacaggaactctcctcctccacctcatcgatgtcaatgacaatgcccccgagcca
gacccccgcaggctggacttctgccagagggacccacacccgcaggtcatcaacatcatc
gaccgcgatcttccccccaacactgagcccttcacagccgaactcacccacggggcaagt
gtcaactggaccatccagttcactgatgaagagaaaagaaattctctccttctgaagcct
gcgaaacacctggaggtgggtgattacaaagttaacctcaagctcgcggatcaacagaag
aaagaccaggtgaccacgttggatgtgtttgtgtgtgactgcgaagggaacaacaactgt
aagcgcctgagcccatacgtcgaggccggactccaggtccccgccatcctgggcattctc
ggtggcatcctcgccctgctgatcctgctgttgctgctgctgctgtttatccggaggagg
acggtggtcaaagagcccttactgccgcccgaggacgacacccgggacaacgtttattac
tacgacgaagaaggaggcggcgaagaggaccaggactttgacttgagccagttgcacaga
ggcctggatgctcggcccgaagtgactcgcaacgacgtggcgcccactcacctgaccatg
ccccagtatcggccacgtcctgcgaatccagacgaaattggaaacttcattgatgaaaac
ctgaaggcggccgacacggaccccacggcgcccccctacgactccctgctggtgttcgac
tacgagggcagcggctctgatgcggcctccctcagctccctgaactcctcagactcggac
caggaccaggactacgactacctgaatgagtggggcaaccgctttaagaaactggccgac
atgtacgggggcggcgaggatgactga
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