Sorex fumeus (smoky shrew): 130043728
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Entry
130043728 CDS
T10594
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
130043728 (TAF1C)
BRITE hierarchy
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Other DBs
NCBI-GeneID:
130043728
NCBI-ProteinID:
XP_055992119
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Position
Unknown
AA seq
842 aa
AA seq
DB search
MDFPRTLQPTLFTAGPLGLSDAPSLSLTSSWKEALSLPEALPRDPKTGASPSATRLLWAP
ETPGPLPLLPPGPEPWDPGVMAVDLLFRGGRSFRRAPRVVLDATEQLSHFMWDHGDVAFA
PLGKLMLENFKLEGARSRSKRKTVVSVERLLQDLGGYQPWGCPWAHMSHRLRRFSILGGP
VLGHSVATLLAELLREELALRWQQLLLDDAVTGGALAWVPGPLPHAGQLVCPAGGALDQL
HLLEVSVNTEGDPEVLGEPRRIQLRGPVRQVATRTVQGEPLLAVRSDYHCGLWKLDRRGR
PAAVQVLQVTKGATGVSLSPHLPGELAVCSQSGAVCLWSPQDGLRQVYKDPQTLVFRDPS
PWRWADFSAHPRVLTVADRTGVKIIDTQGPRGCGLLLFRAGAEASCQKGERILLVKHLGE
PVHPTLHLVCTQFSLYLVDERLPLVPMLKWTHGLPSAPLLAHLLPAPAPGLPHPLLLGSQ
GGQVQLLTFTGDSASAPRLAGPPQSLPCRSDSLSAFPLLEPSSHRRLQERLSAPTIGLTA
ISPPSTGASTPVLLLLQLSAAGDVFHQRLRLRADPRPPGEDAEPGARAPAASWTPAAAAC
CSRWLQALLRVPAPPPAWAAPTFSPRCSLRCAKLQAPAGRVPEGLRAAMAGGRPLQRGDL
GPPPAAEPPPAPEPGPDDELAERLEAAWDGQLAAWWQRRLGGGAAPGARRRRTKRRAALS
STFSSLSCRSDLPSPPRSPAAAAPDAPDARPRPPATPPAPEPELGAPEPWARRIPAERQR
TLRDYMAELPLRGAAPTPTPTPPSQTPSLGASPRRPPLPGSQASAPATPAIPRPRKRARM
GF
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggactttccccgcacgctgcagcccacgctgttcacagccggccccctaggcctgagc
gacgcccccagcctgtccttgaccagcagctggaaggaagccctgagcctgcccgaggct
ctgccgcgggaccccaagactggggcgtcaccctcggcaacgcggctgctctgggcgccg
gagacccctgggcccctccccctgctgcctcctgggccagagccctgggaccctggggtg
atggcagtggacctgctcttccgtggaggtcgctcgttccggagggcgccgcgtgtcgtg
ttggatgccaccgagcagctcagccacttcatgtgggaccatggtgatgtggcctttgcc
ccgctggggaagctgatgctggagaacttcaaattggagggcgcgcggagccgctcaaag
aggaagacggtggtcagcgtggagaggcttctgcaggaccttggcggataccagccctgg
ggctgcccctgggcccacatgagtcaccggctgcgccgcttctccatcctgggggggccg
gtgctggggcactcggtggccacgctgctggccgagctgctgcgggaagagctggcgctg
cgctggcagcagctgctgctggacgacgcggtcacggggggcgccctggcctgggtgccc
ggccccctgccccacgccgggcagctggtctgccctgcgggcggcgccctggaccaactg
catctgctcgaggtcagcgtgaacacagagggggaccctgaggtactcggggagcccagg
cgtatccagctccgggggcccgtccggcaggtggcgacccgcacggtccagggagaaccc
ctgctggccgtgcgctccgactaccactgcggcctgtggaagctggacaggcggggccgg
ccggccgctgtccaggtgctgcaggtcacgaagggcgctactggggtcagcctcagccct
cacctgcctggggaactggccgtctgcagccagtcaggagccgtctgtctctggagcccc
caggacggcctgcggcaggtgtacaaggacccccagaccctggtgttccgggacccctcc
ccctggcgctgggcagacttctccgcccatcctcgggtgctgaccgtcgctgaccgcacc
ggggtgaagatcattgacacgcagggcccccggggctgcggcctgctgctcttccgcgca
ggcgcagaggcctcgtgccagaagggggagcgcatcctcttggtcaagcacctgggggag
cccgtgcaccccacactccacctcgtctgcacccagttctccctgtacctggtggacgag
cgcttgcccctggtgcccatgctcaagtggacccacggcctcccctcggcgcccctgctg
gcccacctgctgccggcgccggcgccgggcctcccgcacccgctgctcctggggagccag
ggcgggcaggtgcagctcctgaccttcacgggagacagcgcctcggccccccgcctggcc
gggccgccccagtccctgccctgcaggagcgattccctctcggccttccctctactggag
cccagcagccaccggaggctgcaggagcggctgagcgccccgaccataggtctgaccgcc
atcagtccgccctccaccggcgcgtccaccccggtcctactgctgctccagctctccgcc
gcgggggacgtcttccaccagcgcctccgcctccgggcagacccccggcctcccggggag
gacgcggagcccggcgcccgcgcgcccgccgcctcctggacccccgcggccgcggcctgc
tgcagccgctggctccaggccctgctccgggtgcccgcgccgccccccgcctgggccgca
cccaccttctcgccccgctgctcgctgcgctgcgccaaactgcaggcaccggccgggcgc
gtgcccgagggtctccgcgccgccatggccggggggcggccgctgcagcggggggacctg
ggcccgccgccggccgccgagccgccgccggcccccgagcccggccccgacgacgagctg
gccgagcgcctggaggcggcctgggacggccagctggccgcctggtggcagcggcggctg
ggcggaggcgcggcgcccggggcgcggcggcggaggaccaagcgccgcgccgcgctgtcc
agtaccttctcgtccctcagctgccgctcggacctccccagccccccgcgcagcccggcc
gccgcggcccccgacgcccccgatgcccgcccgcggccccccgccacgccacccgccccg
gagcccgagctgggcgcccccgagccctgggcgcgccgcatccccgccgagcgccagcgg
accctgcgcgactacatggccgagctgccgctgcggggggccgcgcccacgcccacgccc
acgccgccctcgcagacccccagccttggggccagcccccgccggccgccgcttcccggc
tcccaggcctccgcccccgccaccccggccatccccaggccccgcaagcgcgcgcgcatg
ggcttctga
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