Sorex fumeus (smoky shrew): 130043914
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Entry
130043914 CDS
T10594
Symbol
IRX6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130043914 (IRX6)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130043914 (IRX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Prothymosin
Motif
Other DBs
NCBI-GeneID:
130043914
NCBI-ProteinID:
XP_055992395
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MSFPHFGHPYGSASQFLMSASSGATCCDTAPRSVPDVAAGSAPAAALCCAPYENRLLGSA
RPELGAALGIYGAPYAAAAAAQSYPGYLPYTSEAPALYGALNPQYEFKETAGNFTPGLAQ
AGAYYSYEPTLGQYQYDRYGAVELSSSGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEDRKAEGGAEESLSCLNGDSK
DVTARQEARGLRLSDLEDLEEEEEEEDAEEEEAVAAATNRLAAFHKDTQTLLAPCAAAPE
DALKRRACVLAAPHFSCNEPRGSGEADFLQAEPEGPTLTVHYAPSPKPRIWSLARTAAAS
ALEGAPSPPMPRSPECRRLMPRELPGLGTRPAISRESACEEPPRVAKAFGMATFALQRPP
QNCPLPCARWGNPAVPCQYPSSGAEAG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcactttggacacccgtacggcagcgcttcccagtttctgatgtctgca
agttccggcgccacttgctgcgacacggccccgcgttccgtccccgacgtagctgcaggc
tccgcgccggcggctgcgctctgctgcgccccgtatgagaaccggctgctaggcagtgcg
cggcccgagctgggagcggccttgggcatctacggagccccctacgcggccgcagccgcc
gcccagagctaccccggctacctgccctacacctccgaggcacccgcgctgtacggagcg
ttgaatccacagtacgaattcaaggaaactgccgggaactttactccaggcctggcacag
gcaggagcttactactcctatgagcctactctggggcagtaccaatatgaccggtacgga
gctgtggaattgagcagctcaggccgcaggaagaacgccacgcgcgagaccaccagcacg
ctcaaggcctggctcaacgagcaccgcaagaacccctaccccaccaagggcgagaagatc
atgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaacgcg
cgccggcgcctcaagaaggagaacaagatgacctgggcacccaagaacaaaggcggagag
gacaggaaggcggagggtggggcagaggagtcgctgagctgcctaaatggtgactccaaa
gatgtgactgcccgccaagaggctcgagggctccggctgagtgacctggaagacctggag
gaagaggaggaagaggaggacgcggaagaagaggaggcagtggccgcagccacgaacagg
ctggccgcgttccacaaggacacgcagaccctgctagcaccctgcgccgccgctccagag
gacgcgctgaagcgcagggcgtgcgtcttggcggcgccccatttctcctgcaatgagccc
cgcgggtcgggagaagcagacttcctccaggccgagcccgagggccccacgttgacagtg
cactacgcacccagccccaaaccccgcatctggtctctggcgcgcactgcagccgccagc
gccttggaaggtgcccccagcccgcctatgccgcgcagccctgaatgccgccgtctgatg
cccagagagctgccaggcttgggcaccaggccggcgatctccagagagtccgcgtgcgaa
gagcctccccgagtagccaaagcctttggaatggccacgtttgcgctgcagcggccgccg
cagaactgtccgctgccttgcgcgcggtgggggaacccagcagtgccatgccagtacccc
tcctccggagctgaagcaggttag
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