Sorex fumeus (smoky shrew): 130043921
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Entry
130043921 CDS
T10594
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04137
Mitophagy - animal
sfum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130043921 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130043921 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130043921 (AMFR)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
130043921 (AMFR)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130043921 (AMFR)
Multi subunit type E3
ERAD complex
130043921 (AMFR)
LMBR1L-GP78-UBAC2 complex
130043921 (AMFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf-RING_Vps41
zf_RING_Vps8
Form-deh_trans
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
130043921
NCBI-ProteinID:
XP_055992404
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MPLLFLERFPWPSLRTYAGLSGLALLATIVSAYRALRRPDAADPEEPLAPPEPPEPGASA
GGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQYIVFGPLRVSERQHLKDKFWNF
IFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGR
VLSLLVAMLLSCCGLAVVCCVTGYNHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLN
HEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEV
QRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCL
RSWLEQDTSCPTCRMSLNIADNNRVREDHQGENLDENLVPVAAAEGRPRLNQHNHFFHFD
GSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRS
VEITTDNILEGRIQVPFPTQRSDSIRPALNSPMERPSGDQEEGETSVQSERVPLDLSPRL
EEASDFGELEVEPSEGEDFEARGGRFSKSADERQRMLVQRKDDLLQQARKRFLNKSSEDD
SASESLRRPSEGTTSDPVTLRRRMLAAAAERRLQKQQAS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctcgagcgcttcccctggcccagcctgcgcacctacgcgggcctc
agcggcctggccctgctggccaccatcgtcagcgcctaccgcgcgctccgccggcccgac
gccgccgaccccgaggagccgctggcgccgcccgagcccccggagccgggcgcgagcgcg
gggggcccgcgggcccgcgacgtggcccagtacctgctgtccgacagcctgttcgtctgg
gttctagtaaacactgcttgctgtgttttgatgttggtggctaaactaatccagtatatt
gtgtttggccctcttcgagtgagcgagagacagcacctcaaagacaaattttggaatttt
attttctacaagttcattttcatttttggtgtgctgaatgtccagacagtggaagaggtg
gtcatgtggtgcctgtggtttgctggacttgtattcctacatctgatggttcagctctgc
aaggatcgatttgaatatctttccttttctcccaccacaccgatgagcagccatggccgg
gttctgtcgctcttggtggccatgctgctctcttgctgtgggctagcggttgtgtgctgt
gtcacaggctacaaccatggaatgcacacattggctttcatggcagcagagtctcttctt
gtgacagtgaggactgctcatgtgattctacgatacgtaattcatctctgggacctgaac
catgaaggaacctgggaagggaagggaacgtatgtctattacacagattttgtcatggag
ctcacactcttgtccttggacctcatgcaccatattcatatgttgttatttggcaacatc
tggttatctatggcaagtttggtcatctttatgcagttgcgttacctgttccatgaggta
cagcgccggatccgtcggcacaagaactatttgcgtgtggttgggaacatggaagccagg
tttgcagttgctactccggaggagcttgcagtcaataacgacgactgcgccatctgctgg
gactcgatgcaggctgccagaaaacttccctgtggacatctcttccacaactcctgtctt
cgctcctggttagaacaagacacctcctgcccaacatgcagaatgtctctcaacatcgct
gacaataatcgggtccgagaagaccaccaaggagagaacttggatgagaatttggttcct
gtagcagcagctgaaggcagacctcgcttaaaccaacacaatcacttcttccactttgat
ggctcccgaattgccagttggctgccgagtttctcagtggaagtgatgcacaccaccaat
attctgggcataacacaggccagcaactcccagctgaatgccatggctcatcagattcaa
gaaatgtttccccaagttccctaccaccttgtgctgcaggacctacaactgacacgctct
gtggaaataacgacagacaatattctggagggaaggatccaagtccctttccctacacag
aggtcggacagcattagacctgcactcaacagtcccatggaaaggcccagtggtgaccag
gaggagggagagacctctgttcagagtgagcgtgtgccactggacctcagccctcggctc
gaggaggcctcagacttcggcgagttggaagtggagcccagcgagggggaagactttgag
gcacgaggcggccgcttctccaagtccgccgatgagcgacagcgcatgttagtccagcgg
aaggatgacctgctgcagcaagctcggaagcgcttcttgaataaaagttctgaagatgac
tcagcctccgagagtctgaggcgcccttcggaaggcacgacctctgatcccgtgaccctt
cgacgccggatgctggccgctgcggctgaacggagacttcagaagcagcaggcctcttag
DBGET
integrated database retrieval system
