Sorex fumeus (smoky shrew): 130043927
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Entry
130043927 CDS
T10594
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130043927 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130043927 (EXOSC6)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130043927 (EXOSC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
130043927
NCBI-ProteinID:
XP_055992414
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MPGDHRRIRGPEESQPPQLYAAEEEAEAPAPRDPTRLRPVYARAGLLSQAKGSAYLEAGG
TKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPQGGGEE
RELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGIEMYDL
VVGCGLSRAADPAAAWLLDPTRLEEECAAASLTVALMPVLNQVAGLLGSGEGGPTESWAE
AVRLGLEGCQRLYPVLQQCLVRAARRRGAAAPP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctggggaccaccgccgcatccgcgggcccgaggagtcgcagccgccgcagctgtac
gccgccgaggaggaggccgaggcgcccgcgccgcgcgacccgacgcggctgcggcccgtg
tacgcgcgcgcggggctgctgagccaggccaaaggctcggcctacctggaggcgggaggc
accaaggtgctgtgcgccgtgtcgggcccgcgccaggccgagggcggcgagcgcggcggc
ggcccggcgggcgcgggcggcgaggcccccgccgcgctgcgcggccgcctgctctgcgac
ttccgccgcgcgccgttcgccggccgccggcgccgcgccccgcagggcggcggggaggag
cgcgagctggcgctggcgctgcaggaggcgctggagccggccgtgcgcctgggccgctac
ccgcgcgcgcagctcgaggtgtcggcgctgctgctcgaggacggcggctcggcgctggcc
gccgcgctcacggccgccgcgctcgccctggccgacgcgggcatcgagatgtacgacctg
gtggtgggctgcggcctgagccgcgccgccgaccccgcggccgcctggctgctggacccc
acgcggctcgaggaggagtgcgccgccgccagcctcaccgtggcgctcatgccggtgctc
aaccaggtggccggcctgctgggcagcggggagggcggcccgaccgagagctgggccgag
gccgtgcgcctgggcctcgagggctgccagcgcctctaccccgtgctgcagcagtgcctg
gtgcgcgccgcccgccggaggggcgccgccgcgccgccctga
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