KEGG   Sorex fumeus (smoky shrew): 130043927
Entry
130043927         CDS       T10594                                 
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130043927 (EXOSC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfum03019]
    130043927 (EXOSC6)
Messenger RNA biogenesis [BR:sfum03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     130043927 (EXOSC6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 130043927
NCBI-ProteinID: XP_055992414
LinkDB
Position
Unknown
AA seq 273 aa
MPGDHRRIRGPEESQPPQLYAAEEEAEAPAPRDPTRLRPVYARAGLLSQAKGSAYLEAGG
TKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFAGRRRRAPQGGGEE
RELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGIEMYDL
VVGCGLSRAADPAAAWLLDPTRLEEECAAASLTVALMPVLNQVAGLLGSGEGGPTESWAE
AVRLGLEGCQRLYPVLQQCLVRAARRRGAAAPP
NT seq 822 nt   +upstreamnt  +downstreamnt
atgcctggggaccaccgccgcatccgcgggcccgaggagtcgcagccgccgcagctgtac
gccgccgaggaggaggccgaggcgcccgcgccgcgcgacccgacgcggctgcggcccgtg
tacgcgcgcgcggggctgctgagccaggccaaaggctcggcctacctggaggcgggaggc
accaaggtgctgtgcgccgtgtcgggcccgcgccaggccgagggcggcgagcgcggcggc
ggcccggcgggcgcgggcggcgaggcccccgccgcgctgcgcggccgcctgctctgcgac
ttccgccgcgcgccgttcgccggccgccggcgccgcgccccgcagggcggcggggaggag
cgcgagctggcgctggcgctgcaggaggcgctggagccggccgtgcgcctgggccgctac
ccgcgcgcgcagctcgaggtgtcggcgctgctgctcgaggacggcggctcggcgctggcc
gccgcgctcacggccgccgcgctcgccctggccgacgcgggcatcgagatgtacgacctg
gtggtgggctgcggcctgagccgcgccgccgaccccgcggccgcctggctgctggacccc
acgcggctcgaggaggagtgcgccgccgccagcctcaccgtggcgctcatgccggtgctc
aaccaggtggccggcctgctgggcagcggggagggcggcccgaccgagagctgggccgag
gccgtgcgcctgggcctcgagggctgccagcgcctctaccccgtgctgcagcagtgcctg
gtgcgcgccgcccgccggaggggcgccgccgcgccgccctga

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