KEGG   Sorex fumeus (smoky shrew): 130044171
Entry
130044171         CDS       T10594                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130044171 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfum03019]
    130044171 (EXOSC5)
Messenger RNA biogenesis [BR:sfum03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     130044171 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 130044171
NCBI-ProteinID: XP_055992761
LinkDB
Position
Unknown
AA seq 233 aa
MEVLSDSKVRAESETQAGPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPA
EVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVLQV
ISDAGSLLACCLNATCMALVDAGVPMRALFCGVTCALKSDGTLVLDPTARQEQEARAVLT
FALDSVDRKLLMSSTKGLYSDAELQQCLAAAQAATHHVFRFYRDSLQRRYSKS
NT seq 702 nt   +upstreamnt  +downstreamnt
atggaagtgctatctgactccaaggtgcgtgctgagtctgaaacccaggctggtcccagg
ggcccgggttgcagccttcggcactttgcctgcgaacagaacttgttgtcccgaccggat
ggctctgcctctttcctgcaaggggacacctctgtcctggcgggggtgtatgggccggcc
gaggtcaaggtcagcaaggagatcttcaacaaggccacgctcgaggtgatcctgaggccc
aagattggactgcctggtgtagcagagaagagccgggagagactcatcaggaacacatgt
gaagcagtggtcctgggggccctgcacccccgaacctccatcactgtagtgctgcaggtc
atcagtgacgctggctccctcctggcctgctgcctgaatgccacctgcatggccttggtg
gatgcgggggtgcccatgcgggccctcttctgtggggtcacctgtgccctgaagtctgat
gggacccttgtgctggaccccacagcccggcaagagcaggaggcccgggcagtcctgacc
ttcgccctggacagcgtggatcggaagctgctcatgtccagcactaagggcctctactct
gatgctgagctccagcagtgtctggccgcggcccaggcggccacccaccatgtcttccgc
ttctaccgggactcgctgcagagacgttactccaagagctga

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