Sorex fumeus (smoky shrew): 130044171
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Entry
130044171 CDS
T10594
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130044171 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130044171 (EXOSC5)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130044171 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
130044171
NCBI-ProteinID:
XP_055992761
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MEVLSDSKVRAESETQAGPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPA
EVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVLQV
ISDAGSLLACCLNATCMALVDAGVPMRALFCGVTCALKSDGTLVLDPTARQEQEARAVLT
FALDSVDRKLLMSSTKGLYSDAELQQCLAAAQAATHHVFRFYRDSLQRRYSKS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgctatctgactccaaggtgcgtgctgagtctgaaacccaggctggtcccagg
ggcccgggttgcagccttcggcactttgcctgcgaacagaacttgttgtcccgaccggat
ggctctgcctctttcctgcaaggggacacctctgtcctggcgggggtgtatgggccggcc
gaggtcaaggtcagcaaggagatcttcaacaaggccacgctcgaggtgatcctgaggccc
aagattggactgcctggtgtagcagagaagagccgggagagactcatcaggaacacatgt
gaagcagtggtcctgggggccctgcacccccgaacctccatcactgtagtgctgcaggtc
atcagtgacgctggctccctcctggcctgctgcctgaatgccacctgcatggccttggtg
gatgcgggggtgcccatgcgggccctcttctgtggggtcacctgtgccctgaagtctgat
gggacccttgtgctggaccccacagcccggcaagagcaggaggcccgggcagtcctgacc
ttcgccctggacagcgtggatcggaagctgctcatgtccagcactaagggcctctactct
gatgctgagctccagcagtgtctggccgcggcccaggcggccacccaccatgtcttccgc
ttctaccgggactcgctgcagagacgttactccaagagctga
DBGET
integrated database retrieval system