Sorex fumeus (smoky shrew): 130044238
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Entry
130044238 CDS
T10594
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04517
IgSF CAM signaling
sfum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130044238 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130044238 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130044238 (SPTBN4)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130044238 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
130044238 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Rv3651-like_N
PH_11
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
130044238
NCBI-ProteinID:
XP_055992868
LinkDB
All DBs
Position
Unknown
AA seq
2624 aa
AA seq
DB search
MRIWRRGGAGGAEQSRAGPGRAGPRTPTGRAAGRGEQRGRWHRRPQAQASPSLMAQVPGE
VDNMEGLSTPNNNNNNPSSRWESPDRGWEREPPAASTAAASLFECSRIKALADEREAVQK
KTFTKWVNSHLARVGCHIVDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHSLENVD
KALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTVILRFQIQVIKIETEDNRETRSAKD
ALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANYNLQRA
FRTAEQHLGLTRLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQV
LEVGKIIERYEELAAELLAWIQRTVSLISNQKFANSLSGVQQQLQAFTAYCTLEKPVKFQ
EKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRAELIRQ
EKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIAAYEER
VQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQKVFQEM
VYMVDWMEDMQAQLLSRECGQHLVEAEDLLQKHGLLEGDIAAQSERVEALNAAALRFSQL
QGYQPCDPQVICNRVNHVHGCLAELQEQAARRRAELEASRSLWALLQELEEAESWARDKE
RLLEAAAGGGGGAAGAAGTAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRRGEEL
AAAGGAVGAGAETAHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLDGL
LDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATLGGASGA
GPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQWLL
AMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVRSCQDHL
NSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQWRLS
GLEAALQALEPRQAALLEEAALLAERFPTQAARLHQGAEELGAEWGALASSAQACGEAVA
AAGRLQRFLHDLDAFLDWLVRAQEAAGEGPLPGSLEEADALLTRHAALKEEVDRHEEDYA
RIVAASEALLASDGAELGPGLALDEWLPHLEIGWHKLLGLWEERREALVQAHVYQLFLRD
LRQARAVLRNQEVALSGLELPGTVESVVEALKQHRDFLTTMELNQQKMQVAVQAAQGLLR
QGNAYGAQAQEAVTRMLEKSQENQLRAHQWMEKLHDQLGLQHFLRDCHELDGWVREKMLM
ARDGTRGDGHKLHKRWLRHQTFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKKLGE
IRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVDPGGDLATVNS
QLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRLLEPLQER
RRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGNGLQAVQQHIKKNQGLRREIQAH
GPRLEEVLERAGALASLRSPDAEAVRRGQEQLQSAWSGLREAAERRQQTLDAAFQVEQYY
FDVAEVEAWLGEQELLLMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQCRAL
LEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDELEHWIAEKE
VVAGSPELGQDFEHVTVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHTAAATMAE
WKDGLNESWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTAPPEPR
PSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIANREQEVLQGWKEL
LAACEDARLHVSSTADALRFHSQARDLLSWMDGIASQIGAADKPRDVSSVEVLMNYHQGL
KTELEARAPELTACQELGRSLLLNKSAMADEIQTQLDKLESRKEEVSDKWDRHWAWLQQM
LEVHQFAQEAVVADAWLTAQEPILQSAELGSSVDEVEQLIRRHEAFRKAAAAWEERFSSL
RRLTTIEKLKAEQSKQPPTPLLGRKFFGDPAELAAKAAPLLRPGGYERGLEPLARRASDT
LSAEVRTRVGYVRQELKPERLQPRIDRLPEVPSRVEPTTPPPPAAAEDAAEAPGPPPPAV
AVVEHVRQRPERPEATDRAEELPRRRRPERQESVDHPEETARRRRAERQESAEHEVAHSL
TLGRYEQMERRRERRERRLERQESSEQETPVRGELVKGKATLADIVEQLQEKEAGPGLPA
GPSLPQPRELPPGRLPNGLEPLERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSA
PAQGGSAPAPPPPPAHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDAK
GPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEA
VAASVGEHAEIARWGQQTLPTTSSTDEGNPKREAGERRASGRRK
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atgcggatctggcggcgcggcggggccggcggggccgagcagagccgggccgggccgggc
cgggccgggccgcggacgccgaccgggagggcggccggacgcggcgagcagcggggacgg
tggcaccggcggccgcaggcccaggcctcaccttccctgatggcgcaggtaccaggggaa
gtggataacatggagggtctgagcacccccaacaacaacaacaacaacccttcaagccgc
tgggagagcccagaccgaggctgggagcgggagccgcccgctgcctctaccgctgcagcc
tcactctttgagtgctcccggatcaaggccttggcagatgagcgggaagctgtgcagaag
aagaccttcactaagtgggtgaactcgcacctcgcacgcgtgggctgccacatcgtggac
ctgtatgctgacctccgcgacggcttcgtactcacgcggctcctggaagtgctctcaggg
gagcagttgccaaggcccacacgcggtcgcatgaggatccactcgctggaaaacgtcgat
aaggcgctgcagttcctgaaggagcaacgtgttcatctggaaaatgtgggctcacatgac
attgtggatgggaaccaccggcttaccctgggactggtctggacagtcatcctgcgcttt
cagatccaggtcatcaaaattgaaacggaggacaacagggagacacgctcagccaaggat
gcgctgctcctgtggtgccagatgaagacagctggttaccctgaggtgaacatccaaaat
ttcaccaccagctggcgggacggcttggccttcaacgccctcattcaccgacacaggccc
gatctcgtggatttcagcaaactcaccaagtccaacgccaactacaacctacagagagct
ttccgcacggccgagcagcacctggggctgacccgcctgctggaccccgaggatgtgaac
atggaggccccagatgagaagtccatcatcacctatgtggtctctttctaccattacttc
tccaagatgaaggcactagcagtggaggggaagaggattgggaaggtcctagaccaggtg
ttggaggtgggcaagatcattgaacgctacgaggagctggcggctgaactgcttgcctgg
attcagcgcactgtgagcctcatcagcaaccagaagtttgccaactccttgagtggggta
cagcagcagcttcaggcttttacggcctactgcacgctggaaaagcctgtcaagtttcag
gagaaggggaacctggaggtgctactcttcagcatccagagcaagttgcgtgcctgcaac
cgtcgcctctttgtaccgcgggagggctgtggcatctgggacattgacaaggcttgggga
caactggagaaggcggagcatgaacgggaagctgcactgcgggctgagctgatccggcag
gagaagctggagctactggcccagaggtttgaccacaaagtggctatgagagagagctgg
ctgaacgaaaatcagcgcctggtctcccaggacaacttcggctatgagctgccggcagta
gaggcggccatgaagaagcacgaggccatcgaggctgacatcgcagcctacgaagagcgg
gtacagggggtggccgagctagcccaagcgctggcggcagagggctactacgatgcccgg
cgggtggctgcccagcgtgacagtgtcctgcgccagtgggccctgctcactgggctggtc
ggtgcccggaggacgcgactggagcagaacctggccctgcagaaggtctttcaggagatg
gtgtacatggtggactggatggaggacatgcaggctcaactgctgtcccgcgagtgtggg
cagcacctggtggaggccgaggatctgctacagaagcatggcctgctggagggggacatt
gcggcccagagtgagcgcgtggaggcgctcaacgcagctgccctgcgtttctctcagctg
cagggctaccagccgtgcgacccgcaggtcatctgcaaccgcgtgaaccacgtgcatggc
tgcctggcggagctgcaggagcaggcggcacggcgacgcgccgagctggaggcttcgagg
agcctctgggcgctgctgcaggagctggaggaggccgagagctgggcgcgggacaaggag
cgcctcctggaggcggcggcgggcggcggcggcggcgcggcgggggcggcggggaccgcg
ggcggcgcgcacgacctgtccagcaccgcgcgcctcctggcacaacacaagatccttcag
ggcgagctgggcgggcggcgggcgctgctgcagcaggccctgcggcgcggcgaggagttg
gcggccgccggcggtgcggtgggcgcgggcgccgagacggcccacctggctgggctggcg
gagcgcgcggcgagcgcgcggcggcgctggcagcggctggaagaggcggcggcgcggcgc
gaacggcggctgcaggaggcgcgggcgctgcaccagttcggtgccgacctcgacgggctc
ctcgactggctgcgcgacgcctaccgcctggccgccgcgggggacttcggccacgatgaa
gcgtccagccgtcgcctggcgcgccagcaccgcgcgctcactggggaggtggaggcgcat
cgcgggcccgtgggcggcttgcggcgccagctggcgacgctggggggcgccagcggcgcc
gggcccctggtggtggctctgcaggtgcgtgtggtggaggccgagcagctgttcgccgag
gtgaccgaggtggcagcgctgcggcgccagtggctgcgagatgccttggctgtctaccgc
atgtttggcgaggtgcatgcgtgcgagctgtggatcggcgagaaggagcagtggctgctc
gccatgcgcgtgcccgactcactggacgacgtagaggtggtgcagcatcggtttgagagt
ctggaccaggagatgaacagcctcatgggccgggtcctggacgtcaaccacacagtccag
gaactggtagaaggaggtcaccccagttccgatgaggtgcgctcttgccaggaccatctg
aacagcaggtggaaccgcatcgtggagctggtggaacagcgcaaagaggagatgagcgcc
gtgctgctggtggaaaaccacgtgctggaggtggccgaggtgcgcgcccaggtgcgcgag
aagcggagggccgtggagagcgcgccccgcgccggcggcgccctacagtggcgtttgagc
ggcctggaggcggccctgcaagcgctggagccccgccaggcggccctcctggaggaggca
gccctgctggccgagcgcttcccgacgcaggcggcgcggctgcaccagggcgccgaggag
ctgggcgccgagtggggcgcgctggccagctcggcccaggcgtgcggagaggcagtggcc
gcggcggggcgcctgcagcgcttcctgcacgatctggacgcttttctggactggctggtg
cgcgctcaggaggcggcgggcgagggcccgctgccggggagcctggaagaggcggacgcg
ctgctgacgcgccacgcggcgctcaaggaagaagtggaccggcacgaggaggactatgcg
cgcatcgtggcggccagcgaggccctgctggcctccgatggcgccgagctgggaccgggc
ctggctctggacgagtggctgccgcacttggaaatcggctggcacaagctgctcggcctg
tgggaggagcgccgggaggcgctggtgcaggcgcacgtctaccagctcttcctgcgggac
ctacggcaggcgcgcgccgtgctgcgcaaccaggaggtggccctgtcaggtctggagctc
ccgggcacggtggagtcggtggtggaggcattgaaacagcaccgagattttctcaccacg
atggagctgaaccaacagaagatgcaggtggccgtacaggctgcgcagggcctgctgcgg
cagggcaatgcctacggggcccaggcacaggaggctgtgacccggatgctggagaagagc
caagaaaatcaactccgggcccaccagtggatggagaagctccatgaccagctcggcctg
cagcacttcctgcgggactgtcatgagctggatggctgggtccgtgagaagatgctgatg
gcgcgagatggcacgcggggcgatggccacaagctgcataagcgatggctgcgccaccag
acgttcatggccgagctggcacaaaataaggagtggctggagaagatcgagcgggagggt
caacagctgatgcaagagaagccagagctggcagcctcagtgaggaagaagctgggggag
atccggcagtgctgggccgagctggagagcaccacccaggccaaggcgcgccagctgttc
gaggccagcaaggccgaccagctggtgcagagctttgctgagctggacaagaggctcctt
cacatggagagccagctgcaggacgttgaccccggcggggacctggccacggtcaacagc
cagctcaaaaagctacagtcaatggagtcgcaggtggaggagtggtaccgcgaagtggga
gaactgcaggcacagacggcagcgctgcccctggagccggccagtaaggagctggtgggc
gagcggcagaacgcggtgggcgagcgcctggtgcgtcttctcgagcccttgcaagagcgc
cgccgcctgctgctcgcctctaaggagctgcaccaggtggcacacgacctagacgacgaa
ctggcatgggtccaagagcggctgccactggccatgcagactgaacgaggcaatggtctg
caggctgtccaacagcacatcaaaaagaatcagggcctgcggcgggagatccaggcgcac
gggccgcggctggaggaggtgctggagcgcgccggcgcgctggcctcactgcgcagcccc
gacgcggaggccgtgcgccgaggccaggagcagctgcagagcgcctggagcggcctgcgc
gaggcggcggagcggcggcagcagacgctggacgccgccttccaggtggagcagtactac
ttcgacgtggccgaggtggaggcgtggctgggcgagcaggagctgctcttgatgagtgag
gacaagggcaaggacgaacagagcaccctgcagctgctgaagaaacacctgcagctggag
cagggcgtggagaactatgaggagagcatcgcgcaactgtcgcgacagtgccgggcactg
ctagagatggggcacccggacagtgagcagatcagccggcggcagtcccaggtggaccgt
ctgtatgtggcactcaaggaactgggcgaggagcgccgagtgggcctggagcagcagtac
tggctgtaccagctcagccgccaggtggatgagctggagcactggatcgctgagaaggag
gtggtggccggctcgcctgaactcggccaggactttgagcacgtcacggtactgcaggag
aaattctctgagtttgccagtgagacgggcaccgcggggagggagaggctggcagccgtg
aaccagatggtggatgagctcatcgagtgtggccacacggctgcggccaccatggctgaa
tggaaggatgggctgaacgagtcctgggccgagctgctggagttgatgggtacgcgggca
cagctgctggccgcctcacgggaactgcacaagttcttcagcgacgcccgggagctgcag
ggacagatcgaggagaagcggcgacgactgccccgcctgactgcgcctccggaacccaga
cccagtgccagctccatgcagcggaccctgcgcgccttcgagcatgacctgcagctcctc
gtgtcccaggtgcggcagctgcaggaaggggcagcgcagctgcggacggtgtacgcgggc
gagcacgccgaggccatcgccaaccgagagcaggaggtactgcagggctggaaggagctg
ctggccgcctgcgaggacgcgcgtctgcatgtcagctccacagccgacgcgctgcgcttc
cacagccaggcccgggacctgctctcctggatggatggcatcgccagccagatcggggct
gccgacaaacccagggacgtgtcctcggtggaggtgctcatgaactaccaccagggcctg
aagacagagctggaggcgcgggcccccgagctgacagcctgccaagagctggggcgctct
ctgctgctcaacaagagcgccatggcagatgagatccagacacagctggacaagctggaa
agcaggaaggaggaggtgtctgacaagtgggaccgccactgggcctggctgcagcagatg
ctcgaggtacaccagtttgcccaggaggcggtggtggctgatgcctggctcacagcccag
gagcccatcctgcagagtgcggagctgggcagcagcgtggacgaggtggaacagctcatc
cggcggcacgaggccttccgcaaagcagccgcagcctgggaagagaggttcagctccctg
cggcgcctgaccacgatcgagaaactcaaggccgagcagagcaagcagccgcccaccccg
ttgctggggcgcaagttctttggggaccctgcggagctggcggccaaggcagctcccctc
ctcaggccaggcggctacgagaggggcttggagcccctggcccgccgggcctccgacacg
ctgtcggccgaggtgcggacccgggtggggtacgtgcgccaggagctgaagcccgagcgc
ctccagccgcgcatcgaccggctgccggaggtcccgagcagggtggagcccacgaccccg
ccgccgcccgcggccgccgaggacgcggccgaggcccccgggccgcccccgccggcggtg
gccgtggtggagcacgtacggcagcggcccgagcgcccggaggcgacggaccgcgccgag
gagctgcccaggcggcggcggcctgagcgccaagagtcggtggaccaccccgaggagacg
gcgcggaggcggcgggcagagcggcaggagtcggcggagcacgaggtggcacacagcctg
acgctgggccgctacgagcagatggagaggcggcgggagcggcgcgagcggcggctggag
cgccaggagtccagcgagcaggagacgccggtccgaggggaactggtcaaggggaaggcc
accctggccgacattgtggagcagctgcaggaaaaagaggcaggtcccgggctccctgct
gggccgtcgctgcctcagcctcgcgagcttccccccggccgcctacccaacgggctcgag
ccgctcgagcggacgccccggcccgatcggccgcgggcgcgggaccggcccaagccgcga
cggcggccgcggccccgcgagggcggggagggcgggggcagccggcgctcgcgctccgcc
ccggcccagggcggctccgcccccgcgccgccgccgccgcccgcgcacacggtgcagcac
gagggcttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccggtcg
tgggtgagcctgtactgcgttctcagcaagggagagctgggcttctacaaggacgccaag
ggcccagcctctgggggcacacacggcggggagcctttgctcagcctgcacaaggccacc
agcgaggtggctagtgactacaagaaaaagaagcatgtcttcaaactccagacccaggat
ggcagtgaatttttgctccaggctaaggatgaggaggagatgaacggctggctggaggcg
gtggccgcctcggtgggggagcacgccgagattgcacgttggggacagcagacactaccc
accacctcctccacggatgaggggaaccccaagcgggaagctggggagcgccgggccagc
gggcgccggaagtga
DBGET
integrated database retrieval system
