Sorex fumeus (smoky shrew): 130044352
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Entry
130044352 CDS
T10594
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04144
Endocytosis
Brite
Membrane trafficking [BR:
sfum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
130044352 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130044352
NCBI-ProteinID:
XP_055993041
LinkDB
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Position
Unknown
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLSGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaggaaaaactcttagatgaagctata
caggctgtgaaggtccaatcattccagatgaagcgatgcctggataaaaacaagcttatg
gatgctctgaaacatgcttctaatatgctgggtgaactccggacttctatgttatcacca
aagagctactatgaactttacatggctatttctgatgaactacactacttggaagtctat
ctgacagatgaatttgctaaaggaagaaaagtggcagatctctatgaacttgtgcaatat
gctggaaacattattccaaggctttatctgttgatcacggttggagttgtatatgtcaaa
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgtg
cagcatcctttgagaggtttgtttcttcgaaattatcttcttcagtgtactagaaacatc
ttacccgatgaaggggaaccaacagatgaagaaacaactggtgatatcagtgattccatg
gattttgtgctactcaactttgcagaaatgaataaactctgggtgcgaatgcaacatcag
ggacatagccgagacagagaaaaaagagaacgagaaagacaggaactgagaattttagtg
ggaacaaacttggtgcgccttagtcagctggaaggtgtaaatgtggaacgttacaaacag
attgttttgagtggcatactggaacaagttgttaattgtagggatgctctggctcaagaa
tatctcatggagtgtattattcaggttttccctgatgaattccaccttcagacattgaat
ccttttcttcgcgcctgtgccgagttacaccagaatgtaaacgtgaaaaatataatcatt
gctttaattgatagattagctttatttgctcaccgtgaagatggacctggaatcccagca
gatattaaactttttgacatattttcacagcaggtcgctacagtaatacagtctagacaa
gacatgccttcagaggatgttgtatctttgcaagtctctctcatcaatcttgctatgaag
tgttatcctgatcgtgtggattatgttgataaagttctagaaacaacagtggagattttt
aataaactcaaccttgaacatattgccaccagtagtgcagtttcaaaggagttgaccaga
ctcttgaagatacctgttgacacttacaacaatattttaacagtcttgaaattaaaacat
ttccacccactctttgagtactttgactatgagtccagaaagagcatgagttgttatgtg
cttagtaatgttctggattataatacagaaattgtctctcaagaccaggtggattccata
atgaatttagtgtccacgctaattcaggatcagccagatcaacctgtagaagaccctgat
ccagaagactttgctgatgagcagagccttgtgggcagattcattcatcttttgcgatct
gaagatcctgatcagcagtacttgattttaaacacagcacgaaaacattttggagcaggt
ggaaatcaacggattcgtttcacattgccgcctttggtatttgcagcttaccagctggct
tttcgctacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgctcatcagactatcagtgctttgatcaaggcagagttggcagaattaccc
ttgagactttttcttcaaggggctctagctgctggagaaatcggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctttatgaagatgaaatcagtgat
tccaaagcacagctggctgccataaccttgatcattggtacttttgagaggatgaaatgc
ttcagtgaagagaaccatgaacctctgaggactcagtgtgcacttgctgcatccaaactt
ctcaagaaacctgatcagggcagagctgtgagcacctgtgcacatctcttctggtctggc
aggaacactgacaaaaatggagaagagcttcatggaggcaagagggtaatggaatgccta
aagaaagctctaaaaatagcaaatcagtgcatggatccctctctacaagtacaacttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtaacgatt
caggttttgaatcagcttatccaaaagattcgagaagatctcccaaatcttgagtccagt
gaagaaacagagcaaataaacaaacattttcataacactctggaacatttgcgtttgagg
agagaatcaccagaatctgaagggccaatttatgaaggtcttgttctttag
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