KEGG   Sorex fumeus (smoky shrew): 130044376
Entry
130044376         CDS       T10594                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130044376 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfum03400]
    130044376 (XRCC1)
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     130044376 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 130044376
NCBI-ProteinID: XP_055993074
LinkDB
Position
Unknown
AA seq 627 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADAYRKWRAARAGEKTISVVLQLEKEEQIHSLDI
GNDGSAFVEVLVGSSAGGSGEQDYEVLLVTSSFMSPSESRSGSNLNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDSPYGLSFVRFHSPPDKDEPEASPQKVTKLGQFRVKEEDEGA
NSLRPGALFFSRINKTAPGVSAAKDPAGPSYATATLQASSSSSSASLASTAVGSTSKPQE
SPKGKRKLDLNQEEKKPTSKPSAAPPTPSASAPKKPKLFPSPRTSATTPVSAPARGTVPV
KPRGEGSEPKAPRGGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDS
THLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEDEGDSH
SGDEAPKPPRKRTQTKTKPPQAARPPTPEETKPATPAPQDDPDSEGEQSGEQDNGAEDSG
DTEDELRRVAEKREQRQLPDQGENGEDPYAGSTDENTDSEAPPESPSLPVPELPNFFQGK
YFFLYGEFPGDERRMLRRYVTAFNGELEDYMSERVQFVITAQEWDPSFEEALMDNPSLVF
VRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgccatgtcgtgtcttgcagtagccaggactcgacccactgt
gcagaaaacctgctcaaggccgatgcctaccggaagtggcgtgccgcccgggcgggcgag
aagaccatctccgtggtgctccagctggagaaggaagagcaaatacacagcctggacatt
ggcaacgatggctcggccttcgtggaggtgctggtgggcagctcggctgggggctctggg
gagcaagactacgaggtacttctggtcacatcatctttcatgtccccttctgagagtcgc
agtggctcgaacctcaaccgagttcgcatttttggacctgataagttggtgcgggctgca
gctgagaagcggtgggaccgtgtcaaaattgtttgcagccagccatacagcaaggactcc
ccctatggcctaagttttgtgcgctttcacagccccccagacaaagatgagccagaggcc
tccccccagaaggtgaccaagctcggccagttccgtgtgaaggaagaggatgagggcgcc
aactccctgcggcccggggcactcttcttcagccgcatcaacaagacagccccaggtgtg
tctgcagccaaggaccccgcaggccccagctacgcgactgccacactccaggcctcaagt
tcctcctcctcagcctctctggcctccacagcagttggcagcacctccaagccgcaggag
tctcctaaaggaaagaggaaactggatttgaaccaggaagaaaagaagcccaccagcaag
ccatcagctgcaccccctacaccctccgcatctgcacccaagaaacccaaattgtttcct
tccccccgtacctcagccaccaccccagtctctgccccagcaagggggactgtgccagtg
aagcctcgaggagaaggcagtgagcccaaggcaccccgagggggcccacaggagctgggg
aagatcctccagggggttgtggtagtgctgagtggcttccagaaccccttccgctcagag
ctccgtgacaaggccttggaactgggggctaagtaccggccggactggactccagacagc
acccacctcatctgtgcctttgccaacacccccaagtacagccaggtcctgggccttgga
ggccgcattgtgcgcaaagaatgggtgctggactgtcaccgcatgcggcggcggctccct
tcccagaggtacctcatggccggcccgggttcaagcagcgaggatgaaggggattctcac
agtggggatgaagcccccaagccgccccggaagcgcacgcagaccaaaaccaagccccct
caggcagcaagacccccaactccagaggagaccaaaccggccaccccagcaccccaggat
gatcctgactccgagggggagcagtcaggagagcaggacaatggggcggaagattccggg
gacactgaggacgagctgagaagggtggctgagaagagggagcagaggcagctgcctgac
cagggggagaacggcgaggacccgtatgcaggctccacggatgagaacacggacagcgag
gctccacctgagtcccccagcctgccggttcctgagctccccaatttcttccagggcaag
tacttcttcctgtatggagagttcccaggtgatgagcggaggatgctccggcgatatgtc
accgccttcaatggggagcttgaagactacatgagtgagcgtgttcagtttgtgatcacg
gcccaggagtgggaccccagctttgaagaggccctgatggacaacccctccctggtgttc
gtgaggccccgctggatctatagctgcaacgagaaacagaagctgcttccccaccagctc
tacggggtggtgccccaggcctga

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