Sorex fumeus (smoky shrew): 130044417
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Entry
130044417 CDS
T10594
Symbol
GRIN2D
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
sfum
Sorex fumeus (smoky shrew)
Pathway
sfum04020
Calcium signaling pathway
sfum04024
cAMP signaling pathway
sfum04080
Neuroactive ligand-receptor interaction
sfum04082
Neuroactive ligand signaling
sfum04713
Circadian entrainment
sfum04720
Long-term potentiation
sfum04724
Glutamatergic synapse
sfum05010
Alzheimer disease
sfum05014
Amyotrophic lateral sclerosis
sfum05017
Spinocerebellar ataxia
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05030
Cocaine addiction
sfum05031
Amphetamine addiction
sfum05033
Nicotine addiction
sfum05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130044417 (GRIN2D)
04024 cAMP signaling pathway
130044417 (GRIN2D)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130044417 (GRIN2D)
04082 Neuroactive ligand signaling
130044417 (GRIN2D)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
130044417 (GRIN2D)
04720 Long-term potentiation
130044417 (GRIN2D)
09159 Environmental adaptation
04713 Circadian entrainment
130044417 (GRIN2D)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
130044417 (GRIN2D)
05014 Amyotrophic lateral sclerosis
130044417 (GRIN2D)
05017 Spinocerebellar ataxia
130044417 (GRIN2D)
05020 Prion disease
130044417 (GRIN2D)
05022 Pathways of neurodegeneration - multiple diseases
130044417 (GRIN2D)
09165 Substance dependence
05030 Cocaine addiction
130044417 (GRIN2D)
05031 Amphetamine addiction
130044417 (GRIN2D)
05033 Nicotine addiction
130044417 (GRIN2D)
05034 Alcoholism
130044417 (GRIN2D)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130044417 (GRIN2D)
Ion channels [BR:
sfum04040
]
Ligand-gated channels
Glutamate (ionotropic)
130044417 (GRIN2D)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
SH3_YKFC_2nd
MatE
Motif
Other DBs
NCBI-GeneID:
130044417
NCBI-ProteinID:
XP_055993116
LinkDB
All DBs
Position
Unknown
AA seq
1337 aa
AA seq
DB search
MRGAGGPRGPRGPAKMLLLLALACASPFPDEAPGPGGAGGPGGGPGGARPLNVALVFSGP
AYATEAARLGPAVAAAVRSPGLDVRPVALVLNGSDPRSLVLQLCDLLSGLRVHGVVFEDD
SRAPAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLE
EYDWTSFVAVTTRAPGHRAFLSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLGAQLRSVS
AQIRLLFCAREEAEPVFRAAEEAGLTGPGYVWFMVGPQLAGGGGSGAPGEPLLLPGGAPL
PAGLFAVRSAGWRDDLARRVAAGVAVVARGAQALLRDYGFLPELGHDCRAQNRTHRGESL
HRYFMNITWDNRDYSFNEDGFLVNPSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSRYG
RFLQPVDDTQHLMVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAPRPE
KRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSL
TINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT
VFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVL
VWAFFAVIFLASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEK
NIRSNYPDMHSYMVRYNQPRVEEALTQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGS
GKVFATTGYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICHNDKIEVMSSKL
DIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCLGPTQRMDFLLAFSRGMYSCCSAE
AAPPPAKPPPPPQPLPSPAYPPGRPAPGPAPYVPRERASVDRWRRSKGPGPPGAAGLADG
FHRYYGPIEPQGLGVGEARAAPRGPGGRPLSPPAAQPPQKPPPSYFAIVRDKEPAEPPGG
AFPGFPSPPAPPAAAGPGPAGAGAVGPPLCRLAFEDESPPAPARWPRSDPESQPLLGPGA
GGAXGGAGGGAPAAPPPRRAAPPPCPYLDLEPSPSDSEDSESLGGASLGGLEPWWFADFP
YSYAERLGPPPGRYWSVDKLGGWRAGSWDYLPPRGGPAAWHCRHCASLELLPPPRHLSCS
HDGLDGGWWAPPPPPWAAGPPPRRRARCGCPRPHPHRPRASHRAPAAPHHHRHRRAAGGW
DFPPPAPTSRSLEDLSSCPRAAPARRLTGPSRHARRCPHAAHWGGPPLPSASHRRHRGGD
LGTRRGSAHFSSLESEV
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgccggtggcccccgcggccctcggggccccgctaagatgctgctgctgctg
gcgctcgcctgcgccagcccgttcccggacgaggctccggggccgggcggggccggcgga
ccgggcgggggccccggcggggcgcggccgctcaacgtggcgctcgtgttctcgggaccc
gcgtatgccaccgaggcggcgcgcctgggtcctgccgtggcggcggccgtgcgcagcccg
ggcctggacgtccggcccgtggcgctggtgctcaacggctcggacccgcgcagcctcgtg
ctgcagctctgcgacctgctgtcggggctgcgcgtgcacggcgtggtcttcgaggacgac
tcgcgcgcgcccgccgtggcgcccatcctcgacttcctgtcggcgcagacctcgctgccc
atcgtggccgtgcacggcggcgccgcgctcgtgctcacgcccaaggagaagggctccacc
ttcctgcagttgggctcctctaccgagcaacagcttcaggtgatcttcgaggtgctggag
gagtacgactggacgtcattcgtcgcagtgaccacccgtgcccccggccaccgggccttt
ctgtcttacatcgaggtgctgacggacggcagcctggtgggctgggagcatcgcggggcg
ctgacgctggacccgggagctggcgaggccgtgctgggtgcccagctgcgcagcgtcagc
gctcagatccgcctgctcttctgcgcccgggaggaggccgagccggtgttccgggcagca
gaggaggccggcctcaccgggcccggctacgtctggttcatggtgggcccccagctggct
ggaggcgggggctcaggcgcccccggggagccccttctgctgcctggaggtgccccgctc
cccgctggcctcttcgccgtgcgctcagcaggatggcgcgatgatctggcccgacgtgtg
gccgctggtgtggccgtggtggccagaggggcccaggctctgctgcgtgattatggcttc
ctgcccgagctcggccacgactgtcgcgcccagaaccgcacgcaccgaggggaaagcctc
cataggtacttcatgaacatcacttgggataaccgggattactcctttaacgaggacggc
tttctggtgaacccctcgctagtggtcatctccttaaccagagacaggacatgggaggtg
gtgggcagctgggagcagcagaccctccgcctcaagtacccgctgtggtcccgctacggc
cgcttcttgcagccggtggacgacacgcagcacctcatggtggccacactagaggagcgg
ccctttgtcatcgtggagcccgccgatcccatcagtggcacttgcatccgggactctgtt
ccctgccgcagccagctcaaccgcacccacagccccccgccagatgccccccgcccagag
aagcggtgctgcaagggcttctgcatcgacattctgaaacggctggcgcacaccatcggc
ttcagctatgacctctacctggtcaccaacgggaagcacgggaagaagatcgacggtgtc
tggaacggcatgatcggggaggtgttctaccagcgcgccgacatggccatcggctccctc
accatcaatgaggaacggtcggagatcgtagacttctccgtacccttcgtggagaccggc
atcagtgtgatggtggcacgcagcaacggcaccgtgtcaccctcggccttcctcgagccc
tacagccctgccgtttgggtgatgatgttcgttatgtgcctcaccgtggttgctgtcact
gttttcatcttcgagtacctcagccccgtgggctacaaccgcagcctggccacaggcaaa
cgccctggcggctcgaccttcaccatcgggaaatccatctggctgctctgggccctggtg
ttcaataactcggtgcccgtggagaacccgcgaggtaccacgagcaaaatcatggtactg
gtgtgggccttctttgccgtcatcttcctcgccagctacacagccaacctggccgccttc
atgatccaggaggagtatgtggacacggtgtctgggctcagtgatcgaaagttccagcgg
ccccaggagcaatacccacccctgaagtttgggacagtgcccaacgggtccacggagaag
aacatccgcagcaactaccccgacatgcacagctacatggttcgctacaaccaaccccgc
gttgaggaggcgctcacgcagctcaaggcagggaagctggacgccttcatctacgacgca
gctgtgctgaattacatggcccgcaaggacgagggctgcaagctggtcaccatcggctcg
ggcaaggtcttcgccaccacgggctacggcatcgccctgcacaaaggttcccgctggaag
cgacccatcgacttggcgctcttgcagttcctgggggacgacgagattgagatgctggag
cggctgtggctgtcagggatctgccacaacgacaagatcgaggtgatgagcagcaagctg
gacatcgacaacatggcaggcgtgttctacatgctgctggtagccatgggcctctccctg
ctggtcttcgcttgggagcacctggtgtactggcgcctgcgccactgcctgggacccaca
cagcgcatggacttcctgctggccttctcccggggcatgtacagttgctgcagcgccgag
gccgccccgccgcccgccaagccgcccccaccgccgcagccgctgcccagcccggcctac
cccccggggcggcccgcgccgggccccgcgccctacgtgccccgcgagcgcgcctccgtg
gaccgctggcgccgcagcaaggggcccgggccgccgggggccgcgggcctggccgacggc
ttccaccgctactacggccccatcgagccgcagggtctgggcgtgggcgaggcgcgcgcg
gccccgcgcgggcccgggggtcgcccgctgtcgccgccggccgcgcagcccccgcagaag
cccccgccctcctacttcgccatcgtgcgcgacaaggagcctgccgaaccccccgggggc
gccttcccgggcttcccgtcgccccccgcgccccccgccgccgccgggcccgggcccgcg
ggggccggggccgtcgggccgccgctgtgccgcctggccttcgaggacgagagcccgccg
gcgcccgcgcgctggccgcgctccgaccccgagagccagccgctgctcgggcccggcgcg
gggggcgcgnnggggggcgcgggcggcggcgccccggcggcgcccccgccgcgccgcgcc
gcgccgcccccctgcccctacctggacctcgagccgtcgccgtccgactcggaggactcg
gagagcctgggcggcgcgtcgctggggggcctggagccctggtggttcgccgacttcccc
tactcgtacgcggagcgcctggggccgccccccggccgctactggtcggtcgacaagctg
gggggctggcgggccggcagctgggactacctgcccccgcgcggcggcccggccgcctgg
cactgccgccactgcgccagcctggagctgctgccgccgccgcgccacctcagctgctcg
cacgacggcctggacggcggctggtgggcgccgccgccgccgccttgggccgcgggaccc
ccgccccgccgccgcgcccgctgcggctgtccccggccgcacccgcaccggccccgggcc
tcgcaccgcgcgcccgccgccccgcaccaccatcgccaccggcgggccgcggggggctgg
gacttcccgccgcccgcgcccacctcgcgctcgctcgaggacctgagctcgtgtccccgc
gccgcgcccgcgcgccgcctgaccgggccctcgcgccacgcgcgccgctgcccgcacgcc
gcgcactggggggggccgccgctgccctccgcttcgcaccgcagacaccggggcggggac
ctgggcactcgccggggctcggcgcacttctccagtctcgagtccgaggtatga
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