Sorex fumeus (smoky shrew): 130044435
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Entry
130044435 CDS
T10594
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130044435 (HIF3A)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130044435 (HIF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_4
PAS_9
OSR1_C
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
130044435
NCBI-ProteinID:
XP_055993141
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MWQRRRCFSPPPRSPPGEPLVTAANACRSSTELRKEKSRDAARSRRSQETEVLYQLAHTL
PFARGVSAHLDKASIMRLTISYLRMHRLCAAGEWSQVGEPLDACYLKALEGFVMVLTAEG
DMAYLSENVSRHLGLSQLELIGHSIFDFVHPCDQEELQDALTPPQNLSKKKLEASTQRCF
SLRMKSTLTSRGRTLNLKAATWKVLHCSGHLRVYKPPAQTSPARSPRREPPMQCLVLICD
AIPHPGSLEPPLGRGAFLSRHSLDMKFTYCDERIAEVAGYRPTDLIGCSAYEYIHALDSD
AVGQTIHTLLNKGQAVTGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCVHFLLSRV
EETGLVLSLEQTDRPSRRPLQRGTPSQKDTPNPGDSLDISSPRILAFLHPPALSEAALAA
DPRRFCSPDLRRLLAPILDGTSGAATPSAPPAAWRPQSPLAADLPDELLVDMENAHKLLV
LGRDLEAVETDLDIAQDSDDALALEMLAPYISMDDDFQLNSSEQTPMACRRLRGAVPRPR
AQSFHGPSPASPEPSLLPRWGSDPRLSCSSPPRGKPLMAGARKRALAGSIDDDEELLGVR
PPKRSPSLEPEAFLLPPLSLSFLLTGGPALGSQPAPGTPLLELNESLGSASPLLSLYPGD
NTAQPRSHFEPAAGLAQAN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaacgccgcaggtgcttttcccctccacctcgttcccctccaggggagccactg
gtgaccgctgccaatgcctgcaggtcgagcacggagctgcgcaaagagaaatcccgggat
gcggcgcgcagccggcgcagccaggagaccgaggtgctgtaccagctggcacacacgctg
cccttcgcgcgcggggtcagcgcccacctggacaaggcctccatcatgcgcctgaccatc
agctacctgcgcatgcaccgcctctgcgccgcaggggagtggagccaggtgggagagcca
ctggatgcttgctacctgaaagccctggagggcttcgtcatggtgctcactgctgaggga
gacatggcttacctctcagagaacgtcagcaggcacctgggcctcagccagctggagctc
attggacatagcatctttgatttcgtccatccctgtgaccaggaagagctgcaggatgct
ctgacacccccacagaacctgtccaagaagaagctggaggcctccacacagcgctgcttc
tcactgcggatgaagagcaccctcacgagccgcgggcgcaccctcaacctcaaggcagcc
acctggaaggtcctgcactgttctggacacttgagagtctacaagccccctgcacagacc
tcccccgccaggagcccccgccgcgagcctccaatgcagtgcctggtgctcatctgtgat
gccatcccccacccaggcagcctggagccccccttgggccgcggggccttcctcagccgg
cacagcctggacatgaagttcacctactgcgacgagaggatcgccgaagtggcgggctac
aggcccactgacctgatcggctgctcggcctacgagtacatccatgctctggactcggac
gcggtgggccagaccatccataccttgctgaacaagggccaggctgtcactggccagtat
cgcttcctagcccgaagcggcggctacctgtggacccagacgcaggccacagtggtgtca
gggggccggggcccccagtctgagagcatcgtctgcgtccacttcctgctcagccgggtg
gaagagaccggattggtgctgtccctggagcaaacggaccgaccctctcgcagaccccta
cagcggggcaccccctctcagaaggacacccctaatcctggggacagccttgatatctcc
agcccccggatcctggccttcctgcacccgcctgccctgagcgaggccgccttggccgct
gacccccgccgtttctgcagcccggacctccgtcgcctcttggcacccattcttgatggt
acttcaggggctgccacccccagtgcacccccagctgcctggcgcccccagagccctctt
gcggcagatcttcccgatgagctgctcgtggacatggaaaatgcacacaagctcctggtc
ttaggaagagatctcgaggcagtggagacagacctagatatagctcaggacagtgacgat
gctctggccctggaaatgctggctccctacatctccatggacgacgacttccagctcaac
tccagcgagcagacccccatggcctgtcgcagacttcggggggccgtgccccggcctcgc
gcccagagtttccatggcccatcgcctgcatcccccgagccctccctgctgccccgctgg
gggagtgaccctcggctgagctgctccagccctccccgagggaagccccttatggctggt
gcccggaagagagctctggccgggagcatagacgatgatgaggagctgttgggagtgaga
cccccgaagcgatcccctagcttagaacctgaagccttcctgttgccgccactcagcctg
agcttccttctgacaggaggaccagctctgggcagccaacctgctcctggtacccctctc
ctggaactcaacgagtccctgggttcagcctccccgctgctctctctgtaccccggtgac
aacaccgcccagccccggagccacttcgagccagcggcaggcttggcccaggccaactga
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