Sorex fumeus (smoky shrew): 130044765
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Entry
130044765 CDS
T10594
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfum03041
]
130044765 (DDX17)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130044765 (DDX17)
Spliceosome [BR:
sfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130044765 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130044765
NCBI-ProteinID:
XP_055993365
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MRGGGGFGDRDRDRDRGGFGARGGGGLPLKKFGNPGERLRKKKWDLSELPKFEKNFYVEH
PEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQ
CQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQ
QVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRR
CTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN
VGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM
RRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNS
SEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGG
GGGGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYRDRGETDRAGYANGSG
YGSPNSAFGAQAGQYTYGQGTYGAAAYGTSGYTAQEYGASTYGASSTTSTGRSSQSSSQQ
FSGLGRSGQQPQPLMSQQFAQPPGATSMLGYMGQTAYQYPPPPPPPPPSRK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggcggcggcttcggggaccgggaccgggaccgggaccgcggcgggtttgga
gcaagaggtggtggaggccttcctttgaagaaatttggtaatcctggggagcggttacgt
aaaaagaagtgggatttgagtgagctccccaagtttgagaagaacttttatgtggaacat
ccagaagtggccaggctgacaccgtatgaagttgatgaactgcgccggaaaaaagagata
acagtgcgcgggggagatgtctgtcccaagcctgtgtttgccttccatcacgccaacttc
ccgcaatatgtcatggatgtgctgatggatcagcactttacagaaccaactcccattcag
tgccagggattccccttggctctgagtggccgggatatggtgggcattgcgcagactggc
tctgggaaaacattggcgtatttgcttcctgcaattgttcatattaaccaccagccgtac
ttggaaagaggagatggccccatttgcctcgtcttggctccaaccagagagctggcccag
caggtccagcaggtggctgatgactatggcaaatgttctcgattgaagagcacgtgcatc
tacggaggcgctccgaagggcccccagattcgagacttggaaagaggcgtggaaatttgt
atagcgactcctggacgcctgattgatttcctggaatccggaaagacaaatcttcgtcgg
tgtacttaccttgtactcgatgaggctgacaggatgcttgatatgggttttgaaccgcag
atccgtaaaattgttgaccaaatcaggcctgataggcagacattgatgtggagtgctacc
tggccaaaagaagtaaggcagcttgcagaggatttccttcgtgattatacccagatcaac
gtgggcaatctggagttgagtgccaaccacaacatcctccagattgtggatgtctgcatg
gaaagtgaaaaagaccacaagttgattcagctcatggaggaaataatggctgagaaggaa
aacaagaccataatattcgtagagacaaaaagacgctgtgatgacctcacgcgcaggatg
cgcagagatggctggcctgctatgtgtatccatggagataagagtcaaccagaaagagat
tgggtgcttaatgagttccgctctggaaaggcccccatcctcattgccacagatgtagcc
tcccgtgggctagatgtggaagatgtcaagtttgtcatcaactatgactatccaaacagc
tccgaggactatgtccatcggatcggccgaacggcccggagcaccaacaagggcaccgcc
tacaccttcttcaccccagggaatctcaaacaggcccgagagctcatcaaagtgctggaa
gaggccaaccaggccatcaaccctaagctgatgcagctggtggaccacagaggcggcggc
ggcggagggggaggtcgttctcgctaccggaccacttcctcggccaataatcccaatctg
atgtaccaggacgagtgtgaccggagacttcgaggcgtgaaagatggtggccggagggac
tctactagctatcgggatcgtggggagaccgatcgagccggttatgctaacggcagtggc
tatggaagccccaattccgccttcggagcacaagcaggccaatacacctatgggcaaggc
acctatggggcagccgcttacggtaccagcggctacacggcccaggagtacggtgctagc
acctacggggccagcagcaccacctcaactgggagaagctcgcagagctctagccagcag
ttcagtgggctgggccgctccgggcagcagccgcagccactcatgtcccagcagttcgcg
cagcctccgggagctaccagcatgctaggctacatggggcagacggcctaccagtacccg
ccgcccccgccacccccgccgccctcccgcaagtga
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