KEGG   Sorex fumeus (smoky shrew): 130044890
Entry
130044890         CDS       T10594                                 
Symbol
RANGAP1
Name
(RefSeq) ran GTPase-activating protein 1
  KO
K14319  Ran GTPase-activating protein 1
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130044890 (RANGAP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfum03019]
    130044890 (RANGAP1)
Messenger RNA biogenesis [BR:sfum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     130044890 (RANGAP1)
SSDB
Motif
Pfam: RanGAP1_C LRR_6 LRR_4 CPSF100_C Nop14 BUD22 Drc1-Sld2 RNA_pol_Rpc4 Mpp10 CCD97-like_C CobT PTPRCAP DNA_pol_phi Tim54 Presenilin DDHD Tra1_ring CDC45 PI3K_1B_p101 DUF4820 Nse4-Nse3_bdg
Other DBs
NCBI-GeneID: 130044890
NCBI-ProteinID: XP_055993530
LinkDB
Position
Unknown
AA seq 586 aa
MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKEVIKEIEDFEGLEALRLEGNT
VGVEAAKVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLS
DNAFGPDGVRGFEALLRSPACFTLHELKLNNCGMGIGGGKILAAALTDCYRKSSAQGKPL
ALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRV
INLNDNTFTEKGAGAMAKTLKTLRQVEVINFGDCLVRSRGAVAIAEAVRGGLPKLKELNL
SFCEIKKEAALAVAEAVADKGALEKLDLNGNMLGEEGCERLQEVLEGCGLGAVLATLSDD
EGEDDEEEEEEEEEEEEEDEEEEEEEEEEEEDDEEEAPQQRQGEQKSTPSRNILDPTVGE
AAPVLGSPPPADISAFLAFPSPEKLLRLGPKSSALITQQTDTSDPEKVVCTFLKVSSVFR
DEATVRTAVQDAVDALMRKAFGSSSFNANVFVTRLLIHMGLLKSEDKVNVIANLSGPLMA
LTHVVQQDYFPKALAPLLLAFITKPNGALESCSFARHNLLQTLYKV
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggcctctgaagacatcgccaagctggccgagacactggccaagacgcaggtggccggc
ggacagctcagtttcaagggcaagagcctcaaactcaacactgcggaagatgccaaagag
gtgattaaggaaatcgaagacttcgagggcttggaggcgctgcgtctggagggcaacacg
gtgggcgtggaagcggccaaggtcattgccaaggccttggagaagaagtcagagctgaag
cgctgccactggagcgatatgttcacggggaggctgcgctccgagatcccgccggctctg
atctcgctcggggagggcctcatcacggccggggcccagctggtggagctggacctcagc
gacaacgcgtttgggcccgacggcgtgcgcggcttcgaggcgctgctcaggagtcccgcc
tgcttcaccctgcacgaactcaagctcaacaactgcggcatgggcatcggcggcggcaag
atcctggctgcagccctgactgactgttaccggaaatccagcgcccaaggcaagcccctg
gccctgaaggtcttcgtggcgggcagaaaccgtctggagaacgacggagccactgcgttg
gcggaagcttttgggatcatcgggaccctggaggaggtccacatgccccagaacgggatc
aaccacccgggggtcactgcgctggcccaggccttcgccattaaccctctgctgcgggtc
atcaacctgaacgacaacaccttcaccgagaagggtgcgggggccatggccaagaccctg
aagacactgcggcaggtggaggtgatcaacttcggggactgcctggtgcgctccaggggc
gccgtggccatcgctgaggccgtccgcggcggcctgcccaagctgaaggagctgaacttg
tccttctgtgagatcaagaaggaggcggcgctggccgtggccgaggccgtggcggacaag
ggcgcgctggagaagctggacctcaacggcaacatgctgggagaggaaggctgcgagcgg
ctgcaggaggtgctggagggctgcggcctgggcgccgtgctggccaccctcagtgacgat
gaaggtgaagatgatgaggaggaagaggaggaggaagaagaggaggaagaggaagacgaa
gaggaggaggaggaggaagaggaggaggaggaagatgatgaggaagaggcaccgcagcaa
agacaaggagagcaaaagagcacgccctccaggaacattctggaccccaccgttggggaa
gctgccccggtgctgggctccccaccgcccgccgacatctccgccttcttggccttcccg
tcacccgagaagctgctgcgcctgggacccaagagctcggcgctcatcacccagcagact
gacacatccgacccggagaaggtggtgtgtaccttcctgaaggtgtcctctgtgttcagg
gacgaagccacagtgaggacggccgtgcaggacgctgtggacgccctgatgcggaaggcc
ttcggctcgtcctccttcaacgccaacgtcttcgtcacccggctactcatccacatgggt
ctgctcaagagtgaagacaaggtcaacgtcattgccaacctgtcggggcctctgatggcg
ctcacccacgtcgtgcagcaggactatttccccaaggcgctggccccgctgctgctggcc
ttcatcaccaagcccaacggcgccctggaatcctgctccttcgcccgccacaacctgctg
cagacgctctacaaggtgtag

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