Sorex fumeus (smoky shrew): 130044943
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Entry
130044943 CDS
T10594
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130044943 (RNF40)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130044943 (RNF40)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
130044943 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
130044943
NCBI-ProteinID:
XP_055993584
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSGFGNKRAAGDGGSGPPEKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLAE
RLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVETLLRHHENQGEMSSG
TEVPGTQEGPMHDETPLTEPGTSELRDALPVQLRPPLSEPALAFVVALGASSSEEVELQL
QGRMEFSKAAVSRVVEASDCLQRRVEELCQRVYSRGDSEPPGEGARIRTRELGRENRRLQ
DLATQLQEKHHRISLEYSELQDKVTSSETKVLEMETTVEDLQWDIEKLRKREQKLNKHLA
EALEQLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAELQ
GAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATKN
SHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINR
EMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQASGSAHSIPNVVPPDDSTLS
TPAPGKEEGGPGPVGAPDNRKELVAVPATATATSSVKKEELPPPEEDPQVVTPGPQGPSS
RPREPEARPKRELREREGPGLGAPLAAPVLSRADREKAKMEEAKRKESELLKGLRAELKK
AQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRGRIRELEERDRRESKKI
ADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLRE
KDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQGS
LGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREKE
SFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLT
KCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggttcggcaacaaacgcgccgccggcgatgggggctcgggtcccccagagaag
ctgagccgcgaggaaaagaccacaaccaccctcatagaacccattcgcctcggaggcatc
tcctccacggaggagatggacttaaaggtcctgcaattcaagaacaagaaactagccgag
cgcttggagcagcgacaagcttgtgaagatgagctccgagaacggattgagaagctggag
aagcggcaggcaactgatgacgccacactcctcattgtcaatcgctactgggcccagcta
gatgaaactgtggaaacccttctccgacaccatgaaaaccagggagagatgtcttcaggg
acagaggtgcctggaacgcaggaggggccaatgcatgacgaaactcctctcacagaacca
gggacgtcggaactgagggatgccctgcctgtgcagctgcggcccccgctcagcgagcca
gcattggcttttgtggtggccttgggtgccagcagtagcgaggaggtagagctgcagctg
cagggccgtatggaattctccaaggcagcggtgtcccgtgtcgtagaggcctcagactgt
ctgcagcgccgggtggaggaactgtgtcagcgagtgtacagccgaggggacagcgaacct
cctggtgagggagctcggatacgcacccgtgagctgggccgtgagaaccggcgactacag
gacctggccacccagctacaggagaagcaccaccgcatctcactggagtactcagagctc
caagacaaggtgacatcatccgaaacgaaggtgctggagatggagaccacagtagaggac
ctgcagtgggacattgaaaagctgcgcaagcgtgagcagaagctcaataagcacctggca
gaggccttggagcagctcaactctggctactatgtgtcggggagctcctcgggcttccag
gggggccagatcacactcagcatgcaaaagtttgagatgctgaatgcggagttggaagaa
aaccaggaattggccaacagccgcatggcagagctggagaagttgcaggccgaactccaa
ggggctgtgcggactaatgagcgtctcaaggtggccctgcggagccttcccgaggaggtg
gttcgggagacaggggagtaccgcatgctgcaggcccagttctcgcttctctacaacgag
tctctgcaagtgaagacccagctggacgaggcccgggggctactgctggccaccaagaat
tcccatctacggcacatcgagcacatggagagcgatgagctggggctacagaagaagctg
cgcacagaagttatccagctggaggatacactggcccaggtacgcaaggagtatgagatg
ctgcgcatcgagtttgaacagaacctggcagctaatgagcaggcagggcccatcaatcgg
gagatgcgtcacctgatcagtagtctccaaaaccataaccatcagctgaagggggatgcc
cagcgctacaagcggaagctgcgggaagtccaggctgagatcggcaaactccgggcccag
gccagcggctctgcccactccatccccaatgtggtccccccagatgactctacactcagt
actccagctccagggaaagaagagggtgggccaggcccagtgggtgcccccgacaacagg
aaggaattggtggccgtgcctgccactgccactgctacctcatcggtgaagaaggaggag
ctgccccctcctgaggaagacccccaggtcgtcacccctggcccccagggaccctcctca
cggccccgagaacctgaggccaggcccaagcgggagctccgggagcgggaagggcccggc
ctgggagccccgctggcagcaccagtcctgtcacgagctgatcgggagaaggccaagatg
gaggaggccaaaaggaaggagtcggaactcctcaaaggcctccgagcagagctcaagaag
gcccaggaaagccagaaggagatgaaactgctgctagacatgtacaagtcggcgcccaag
gagcagcgggacaaggtgcagctcatggcggctgaacgcaaggccaaggctgaggtggat
gagctgcggggacgcatccgggagctggaggagagggatcgcagggagagcaagaagatc
gcagatgaggatgccctgcggcgcatccggcaggcggaggagcagatcgaacacctgcag
cggaagctgggggccaccaagcaggaggaagaggctctgctctcggagatggacgtgacc
gggcaggctttcgaggacatgcaggagcagaacgggcggctcctgcagcagttgcgggag
aaggatgatgccaacttcaagctgatgtcagagaggatcaaggccaaccagatccacaag
ctgctgcgtgaggagaaggacgagctgggagagcaggttctgggcctcaagtcccaggtg
gatgcccagctgctgaccgtgcagaagctcgaggagaaagaacgggccttgcagggcagc
cttggcggggtggagaaggagctgacactgcgcagccaggccctggagctcaacaagagg
aaggctgtggaagccgcgcagctggctgaggacctgaaggtgcagttggagcacgtgcag
acacggctgcgagagatccagccctgcctggcggagagcagggcggcccgggagaaggag
agcttcaacctcaagagggcccaggaggacatctcacggctgcggcgcaagctggagaag
cagaggaaggtagaggtttacgcagatgccgacgaaatcctccaggaagagatcaaggag
tacaaggcacggctgacctgtccctgctgtaacacccgcaagaaggatgcagtccttacc
aagtgcttccacgttttctgcttcgagtgtgttcggggccgctatgaggcccgccagagg
aagtgccccaagtgcaacgccgcgtttggtgcccacgacttccaccgcgtctacatcagc
tga
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