Sorex fumeus (smoky shrew): 130044989
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Entry
130044989 CDS
T10594
Name
(RefSeq) integrin alpha-X-like
KO
K06462
integrin alpha X
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04610
Complement and coagulation cascades
sfum04810
Regulation of actin cytoskeleton
sfum05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130044989
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
130044989
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
130044989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130044989
04090 CD molecules [BR:
sfum04090
]
130044989
Cell adhesion molecules [BR:
sfum04515
]
Integrins
Integrin alpha subunits
130044989
CD molecules [BR:
sfum04090
]
Proteins
130044989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ITGAX-like_Ig_3
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
Integrin_alpha
VWA_CoxE
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
130044989
NCBI-ProteinID:
XP_055993651
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MPMSAIPVIMTKSSLLLLMVLTSSFCFNLDTEQPTIFRLYRPGFGHSVVQYTYSRASYLV
VGAPQEITAANHTGGLYRCDYLKGTCEQIFLQVPQEAVNMSLGLSLAADTRSSQLLACGP
TVHQACRENLYLTGLCFLMEHNFSTVKMLPNVLQECPRQEQDIVFLIDGSGSISSENFKK
MLTFVKSVIMQFPRPNSQFSLMQFSHKFTVLFTFEEFTSKSDPLKLLDQVQQLGGATFTA
TAIQWATYYLFTASNGARKDASKILIVITDGKKEGDFLTYEKVIPQAEAKGIVRYAVGVG
YAFENKRSYQELEAIASEPSNEHIFRVENFDALKDIQNKLKEKIFAIEGTQTTSSSSFEF
EMSQEGFSAVLTPEGPVLGAVGSFSWSGGALLYPSSTRPTFINMSQENVDMRDSYLGYST
ELALWKGVQNLVLGAPRYQHTGKVVIFTQVDRQWRLNKEVTGTQIGSYFGASLCSVDVNR
DGSTDLVLIGAPHYYEQTRGGQVSVCPWPQGRARWQCEEILRGVQGHPWGCFGAALTVLG
DVNGDKLTDVAIGAPGEQENRGAVYLFHGTPDLGISPSHSQRIASSQISSRLQYFGQSLS
GGQDLSQDGLEDLAVGAWGHTLLLRTRPVLKVLPKIFISPPEIPRSVYECKEETTSFQTL
GEAKICLDIYQSPKSQLDNLQSSVSFDLTLDPGRLSPRAIFKETKMRNLTRVQVLGLGDH
CEVQKLLLLSCVEDSVTPIILRLNFSLEGKPITSHRNLRPVLAMDEQRYFMASLPFEKNC
GADHVCQDDLGISLDFPESKTLLVGSNLELNIKVTVWNNGEDSYGTAITFFYPADLSYRR
VSGIQNQLQKRSLNLACESSPAGSQGTWSTRCSMNHLIFQENTEITFTATFDVSPSAKLG
DQLLLRANVSSENNTPRTNKTTFQLKIPVKYAVDTVIRSHEQSTRYLNFSTSEEEKSFIV
QHRFQVSNLGHRDLPVSINIWVPVELNRMAVWTKSKVSQLQNSSFQCSSEKTAPTEINFL
TQIQKTSVLDCSIANCLRFRCEIPSFGRHEELDFILKGNLSLGWVSQISQKKVLVMSVAE
IMFNRSMYSQFPGQEAFLRTQMEIVLEQYEVYNPIPLIVGSSVGGLLLLALITAALYKLG
FFKRHYKEMMKEENVHTQLENTTSDPQVTQ
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgtctgccattcctgtcatcatgaccaagagttccctcctcctgttgatggtt
ttgacttcgtctttctgctttaacttggacacggagcagccaacaatcttccgcctatac
aggcccgggtttggacacagtgtggttcagtatacttattccagggcttcttatctggtg
gtgggagccccccaggagataactgctgccaatcacacgggtggcctctaccggtgtgac
tacctcaagggcacttgtgaacaaatcttcctccaggtcccccaggaggccgtgaacatg
tctctgggcttatccctcgcagctgacaccagatcttctcagctgctggcctgtggccct
accgtgcaccaggcttgcagggagaacttgtacttaactgggctctgcttcctgatggag
cacaacttctcaacagtcaagatgctccccaatgtcctacaagagtgtcccaggcaagag
caagacattgtgttcctgattgatggctcaggcagcatcagctccgagaattttaagaag
atgttgacatttgtgaagtctgtgattatgcagttcccaagacccaactctcagttctct
ttgatgcagttctcccacaagttcactgtgctcttcactttcgaggaattcacaagcaag
tcagacccactaaaactgctggaccaggttcagcagttgggtggggccactttcacagct
acagccattcaatgggccacatactatttgttcactgcttcaaatggggcccgaaaggat
gcctccaagatcctcatcgtcatcactgatgggaagaaagagggtgatttcctgacctat
gagaaagtcatcccccaggcagaggcaaagggcattgttcgctatgcagtaggggtggga
tatgcttttgaaaacaagcgttcatatcaagaattagaggccattgcgtcagagccctcc
aatgaacatatatttcgagtggagaactttgatgctttgaaagatattcagaacaaactg
aaagagaagatctttgctattgagggtacacaaaccacaagcagcagttcctttgaattt
gagatgtcccaggagggcttcagtgctgtgcttacgcctgaaggaccagtcctgggggct
gtagggagcttcagctggtctggaggtgctcttttgtacccttcaagcacaaggcccacc
ttcatcaacatgtctcaggaaaatgtggacatgagggactcttacctgggttactccacc
gagctggccctttggaagggggtgcagaaccttgtcctgggggctccccgctaccagcat
actgggaaggttgtcatcttcacccaggtggacagacaatggaggctgaataaggaagtc
acagggacccagattggctcctactttggggcctccctctgctctgtggatgtgaacaga
gatggtagcactgacctggtcctcatcggagccccccactactatgagcagacccgaggg
gggcaggtgtctgtgtgcccttggcctcaggggagggctaggtggcaatgtgaggaaatt
ctccgaggggttcaaggtcatccctggggctgttttggggcagccctgacagtgctgggg
gacgtgaatggggacaagctaacggacgtggccatcggggctccaggagagcaggagaac
cggggtgctgtctacctgtttcatggaacccccgacctgggcatcagcccctcccatagc
cagcggattgccagctctcagatctcctccaggctccagtattttggacaatcactgagt
ggaggtcaggacctaagccaggatggactagaagacctggctgtgggggcctggggacac
acactgctgctcaggacaagacctgtgctcaaggtgttgccaaaaattttcatcagcccc
cccgagattcccagatctgtatatgaatgtaaggaggagacgacctcttttcagacacta
ggtgaagctaaaatctgccttgacatttatcaaagtcccaagagtcagctggataacctg
caaagctctgtgagctttgacttgaccctggaccctggccgtctgagtccccgtgccatc
tttaaggagacaaagatgcggaatctcactcgcgtacaagttcttggattaggggatcat
tgtgaggtccagaagttgcttctcctgagctgtgtggaagactcagtgacccccatcatc
ttgcgtctcaatttctccttggaaggcaagcccatcacttctcatagaaacctccggcct
gtactggccatggatgaacaaagatatttcatggcctctcttccctttgagaagaactgt
ggagctgaccatgtatgccaggatgaccttggtatctcccttgacttccctgagtcgaag
accttgttggtgggaagtaatttggagctgaacataaaagtaactgtatggaataatggc
gaggactcctatggaactgcaattactttcttctacccagcagacttgtcttatcgacgt
gtgtcagggatccagaatcagctccagaaacgctccctgaacttggcatgtgaaagttcc
ccagctggaagccagggcacttggagcacccgctgcagcatgaaccacctcatctttcag
gaaaacaccgagatcaccttcacggccacttttgacgtgtctcccagtgccaaactggga
gaccagctacttttgagggctaatgtaagcagtgagaataacactcccaggaccaacaag
acaacttttcagctgaagattcctgtgaagtatgctgtcgacactgtgatcaggagtcat
gaacaatccaccaggtacctcaacttctcgacctcagaagaggagaaaagcttcatagtt
cagcataggttccaggtgagcaatctgggacacagggacctaccagtcagcatcaacatc
tgggttcctgtcgaactgaatcgcatggctgtgtggacaaagtcgaaggtctcccagctc
cagaactcatcttttcaatgctcttcagagaaaacagcacctacagagatcaacttcctg
acccaaattcagaaaacttctgtgttggactgctccattgccaactgccttaggttccgc
tgtgaaatcccctcctttggtagacatgaggaacttgacttcatcctgaaaggcaacctc
agccttggatgggtcagccagatatcacagaaaaaggtcttggtcatgagtgtggctgaa
atcatgttcaacagatctatgtattcccagtttccagggcaggaggcatttttgagaaca
cagatggagatagtgctggaacagtatgaagtctacaaccccatccccctcattgtgggc
agctctgtgggaggactgctgctgctggctctcataacagctgcactgtacaagcttggt
ttcttcaaacgccattacaaagaaatgatgaaggaagaaaatgtacacactcaactggaa
aacacgacatcagaccctcaagtgacccaataa
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