Sorex fumeus (smoky shrew): 130045003 Help Entry 130045003         CDS       T10594                                  Symbol SRCAP Name (RefSeq) helicase SRCAP isoform X1   KO K11661   helicase SRCAP/SWR1 [EC:5.6.2.-] Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:sfum00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     130045003 (SRCAP)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:sfum03036]     130045003 (SRCAP) Chromosome and associated proteins [BR:sfum03036]  Eukaryotic type   Chromatin remodeling factors    SRCAP complex     130045003 (SRCAP)    SWR1 complex     130045003 (SRCAP) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HSA ResIII DEAD HDA2-3 Motif Other DBs NCBI-GeneID:  130045003 NCBI-ProteinID:  XP_055993670 LinkDB All DBs Position Unknown AA seq 3240 aa AA seqDB search MQSSPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP PGPPDGATVPLEGLSLPQAADLANRGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT EKYSDLLSQSLNQPLASSKAGSSPCLGSSSAASSPPPPVSRLDDEDGDFQPQEEEEEDDE ETIEVEEQQEGNDAETQRREIELLRHEGELPLEELLRSLPPQLLGGPSSPSRTPSSHDSD TQDGPEETGEEDSSQVLKVKKTPSVTRCNKRPWQPDEDDEEFTANEDEAEDEEDTIAAEE QLEGEVDHAMELSELAREGELSMEELLQQYAGAYTSDASAPDSGSSDDDDDEVEANSFDC EPEGTIEAEEAPQEDSSSQSDSGEEPSEDEEDEHSEDDETSSSPSEESESDESEESQSQS SADEDDDDGDDDDDDCGVEYLLARDEEQSEADGGSGPPTPGPPTSLGPKKEITDIAAAAE SLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQ TISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGW TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLL LTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKV LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVIN ILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGQFDLIGLE GRVSRYEADTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVV NSPRTAVGPVPVRPPPGPELSAQPTPGPTPPVLPAPLMVSASPVGPPLIPASRPPGPVLL PPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPSPPAPVRLSPAPPPGSSSLLKPLT VPPGYTFPAAPATTTPTTTVTAPSTAVPAPGPAPQRLILSPDMQARLPSGEVVSIGHLAS LAQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLIS QPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLNLPLAANQVPPTMVNNTGVVKIV VRQAPRDGLTPVPPLAPAPRPSGSGLPSVLTPRPTLTPGRLPTPSLGAARASIPTSTLVR PLLKLVHSPSPEVSVSAPGASPLTISSPLPGPASSPMPVPNSSPLASPVSSVPVSSSLPI SVPTTHPAPASAPLTIPISSPLPVSASGPTLLSSVTPTLAPVVSASPGPSLAPVGASPSA STLALGLATTPSISPSQASAHPLLLAPASSHVPGLNSAVATACSPVLVPASALASSFPAA PTPAPAQTSLLTSTPSASQALATSLAPMAAPPTAILATPAPTLTPLSVLAPPQTSVPVLA SSSTPGTPLASASSLVTASTPPLLAPSSTQTMVPAPVPSAIPSPASTQTLTLAPALTSPL GSSSPSQTHSLGTGNPQGAFSAQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLASP PPLAPASPMGSAPAHTLTLAPVSSSSSSSSSSSSSLMAPASVQTLTLSPAPVSMPTLSPA AAQTLALAPVSTQVPASQASSLVVSASGAAPLPVTMVSRLTVPKDEPETLTLRSGPPSPP STATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALAPMYGTE VLDFCTLPQPVASPIGPRSPGPSHPTFWTYTEAARQAVLFPQQRLDQLSEIIERFIFVMP PVEAPPPSLHACHPPPWLAPRQAAFQEQLACELWPRARPLHRIVCNMRTQFPDLRLIQYD CGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQAL MERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV HIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEEPSGSS VPSASEDDEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENEGFPSGE GEETSRPGAEDEEVSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEA ARKDLDQAKEEVFRLPQEEEEGPGAGDEVSSGTGGGSHRRSKKAKAPERPGTRVSERLRG ARAETQGANHTPVTSTHHARSTSTPSRCSPARERVPRPTPRPRPTPAPAPAPAPAPAPAP APAPAPAPAPAAVPAPTPVPVPVPISAPNPVTMLPIHILPSPPLPPQIPPSCSSACTPPP ACTPPPAHTPPPTQTSLLTPSSPLLLGLPSMPVSPLATNVSLGVGPEAELRVQALASTES LVDTASSETSPLPLVPPKDLLPVAVENLPMSEKNLSLTSSAPSPTLETGSVPNGQEQEVP EPAEGTVLTVLPDGEEMPRCLSESNGLELPPAAASDEQLQEPLEADKSVEVVEAQTPSSS PEKPQELIAAEVTAASTSTSATSSPEGPSPVRPPRRRTSADVEIRGQGAGRPGQPPGPKV LRKLPGRLVTVVEEKELVRRRRQQRGTASTLVPVVSETGASPGSPSTHSMSGTESSPPTG GPCEAAPPSTLPTPTQQPFVARRRIELGVTGGGSPENGEGALLTITPPAVKRRRGRPPKK NRSPADAGRGVDEAPSSTSKGKTNGADPGAETLIVADPVLGPQLIPESQPLGPQPLHRPE PIILSPVEKRRRGRPPKARDLPIPGTISSPGDGSLESRTQPLPLPPPLPPLLTCPTATVA NTVTTLTISTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSSSVLESCGMGRRRHPQGQGES EGSSSDEDGSRPLTRLARLRLEAEGMRGRKSEGSMVVAVIQDDLDLAESGPGGLELTPPV ASLTPKLRSTRLRPGSLVPPLETEKVPRKRAGAPVGGGTGLAKRGRLQPPSPLAPEGSVE ESEAEASGEDEEGDGIPRRRPAPRRLGGATTQGDQRILRSSAPPHLTVPTVSHRGRKAKT NT seq 9723 nt NT seq  +upstreamnt  +downstreamnt atgcagagcagtccctcccctgctcaccctcagctcccaatcctacagacacagatggtg tcggacggcatgacaggcagcaatccagtgtcccctgcctcatctagttctccagcctct agtggggcaggtggcatttccccccagcatatagctcaagattcctctctggatggaccg ccaggcccccccgatggtgccacagtgcccttggaggggctcagtctaccccaagctgct gacttggccaacagaggtcccaaatgggagaagagccatgctgagattgcagagcaggcc aaacatgaggctgaaattgagactcgaattgctgagctgcggaaggaaggtttctggtct ctgaagaggctgcctaaagtgccagagcctccccgccccaagggccactgggactatctg tgtgaggagatgcagtggctctccgctgactttgctcaggagcgccgttggaaacggggt gtggcccgtaaggtggtgcgcatggtgattcgacaccatgaggaacaacgacagaaagaa gaacgggctcggagggaggagcaggccaagctgcgtcgaattgcttctaccatggctaag gatgttaggcagttctggagcaatgtggagaaggtggtgcaatttaagcaacagtcacgg cttgaagaaaagcgcaaaaaagctctggatctgcatctagacttcattgtggggcaaact gaaaagtactcagaccttctatctcagagcctcaaccagcctctagcctccagcaaagct gggtcttctccttgccttggctcttcctcagctgcctctagccctccaccccctgtttcc cgactggatgatgaagatggggacttccagccccaggaggaggaggaagaagatgatgag gagacgattgaggttgaagaacagcaggaaggcaatgatgcagagacccagaggcgcgag attgagctacttcgacatgagggagaactgccattggaggagctgctccgttccctcccc ccacagcttctgggagggccttccagtccctcaaggaccccctcatctcatgatagtgat actcaagatgggcctgaagaaactggtgaagaagattcctctcaggtgttgaaggttaaa aaaaccccatctgtcacccggtgcaataagcggccttggcaaccagatgaagatgacgaa gagtttactgccaatgaggatgaagcggaggatgaagaagatactatcgcagctgaagag caattggaaggggaagttgatcatgccatggaactgagcgagttggcgcgagaaggtgaa ctgtctatggaggagctgctgcagcagtatgccggagcttatacttctgatgcctctgcc ccagattctgggagtagtgacgatgatgatgacgaggttgaggctaacagctttgactgt gaaccagaggggactatagaagctgaagaagctcctcaagaggatagtagcagtcagtca gattctggtgaggaaccaagtgaggatgaagaagatgagcattcagaggatgatgaaaca agtagttcaccatcagaggagtctgagtctgatgaatctgaggagtcgcagtcacagagt tcagcagatgaagatgatgatgatggtgatgatgatgatgatgactgtggggtcgagtac ttgcttgcccgtgatgaagagcagagtgaagcagatgggggaagtggtcctcctacccca ggaccccccacttctctaggccctaagaaagaaattactgacattgctgctgcagctgaa agtctccagcctaagggttacaccttggcaactacccaggtaaagacgcctattcctctc cttttgcgaggccagcttcgggaataccaacacattgggttggattggctggttaccatg tatgagaagaagcttaacggcattcttgctgatgagatggggctaggcaagacgattcag actatctccctgcttgcccacttagcctgtgaaaaaggtaactggggtcctcatttgatc attgtccccaccagtgtgatgttgaactgggagatggagctgaaacgttggtgtcccagc tttaaaatcctcacttactatggagctcagaaggagaggaaactcaagcggcagggctgg accaagcccaatgccttccatgtgtgtatcacatcttacaagttggtgctgcaggaccat caggcctttcgtcgcaagaactggcgctatcttatcctggatgaggctcagaacatcaag aatttcaagtcacaacgctggcaatcactgctcaacttcaacagccagaggcgcctactc ctaacaggaactccattgcagaacagcctcatggagctgtggtccttgatgcattttttg atgccccatgtcttccagtctcatcgcgagttcaaagaatggttctctaaccccctaact ggcatgattgaaggcagccaagagtataatgaaggtctagtcaaacgcctccacaaggtt ttgcggccttttttgctccggagagttaaggtggatgttgagaaacagatgcctaaaaag tatgaacacgttatacgctgtcgactctccaagcgccaacgctgtctttatgatgacttc atggcacagaccacaacaaaggagacactagccactggccatttcatgagcgtcatcaac attttgatgcagctccgaaaagtctgcaatcatccaaacttgtttgaccctcgacctgtt acttcccctttcatcaccccaggcatctgctttagcaccgcctctctggtgctaagggcc actgatgtccacccccttcagcgaatagacatgggtcagttcgatcttattggcctggag ggtcgtgtctctaggtatgaggcggacacatttctgccccgacaccgcctatcccgccgg gtattattagaagtcgctactgctcctgaccccccaccccggcccaagccagtcaagatg aaagtcaacaggatgctgcagccagtgcccaagcaagaaggccggacagtggtggtagtg aacagcccaagaaccgctgtgggccctgtaccagtccgacctcctccaggccctgagctc tcagcccaacccacccctggcccaactcctccagtactgccagcaccactgatggtatcg gcttcgcctgttgggcccccacttattccggcatcccggccccctggcccagttttatta cccccactacagccaaacagtggatctttaccccaggtgttgccatcccctctaggggtt ttgagtggtacctcacgacctcccacaccaaccttgtccctgaaaccctccccacccgcc cctgttcgcctgagccctgccccaccaccaggctcctctagcctattaaaacccctgaca gtgccaccaggatacaccttcccagctgcccctgccactaccacgcctaccaccacggtc acggctcccagtacagcagtgccagctccgggtcctgcacctcagcgcctcatcctgtct cctgatatgcaagctcgcctcccctcaggtgaagtggtcagcatcgggcatttggcctca ctggcacaacgtccagtggctagcgcagggggaagcaaacctctcaccttccaaatccag ggcaacaagctgactttgactggtgcccaggtgcgccagcttgctgtggggcagccccgc ccgctgcaaaggaatgtggtgcacctggtgtcagcaggggggcagcaccacctcatcagc cagcctgcccatgtggccctcatccaggccgtggccccgacccctggccctacccctgtc tctgtgctgccttcttcgacccccagcaccacccctgcccctactggcctcaaccttccg cttgctgctaaccaggtgccaccaaccatggtgaataatacaggcgtggtgaagattgtt gtgagacaggcacctcgggacggactgactcctgttcctcctttggctccagcacctcgg ccttcaggttctgggcttccatctgtgttgactccacgtcccacgttaacccctggtcgg ctacccacaccctctctgggtgctgcccgggcttccatacccacgtccactctggtgagg ccccttctgaagttggttcacagtccttcgcctgaagtcagtgtttcagcacctggagct tctcccttgacgatctcatctcctctgcctgggccagcctcttctccaatgcccgttccc aattcctctccactggccagtcctgtgtcctcagttccagtgtcatcttcactgcccatc tctgtccccaccacacatcctgccccagcctcagctccactcaccatccccatctcatcc cccttacctgtttcggcttccgggccaaccctgttgagcagtgtgactccaacactggca cctgttgtatcagcatctcctggaccctctttggcaccagttggggcttccccgtcagca tcaaccttggctcttggtttggccacaactccatccatatctccgtctcaggcttcggct caccctttattgttggctccagcttcttcacatgttccaggattgaactcagccgtggcc acagcgtgttcacctgtcctggtgccagcctcagctttggccagttcttttcctgcagct ccaactcctgctccagctcagacttcccttctgacttcaacaccctcagcgtctcaggcc ttagccacctcactggctcccatggctgctccaccgacagcaatcctggctactccagct cctactctgactcctctttcagttttggctccaccacagacttcagttccggttttggct tcctcgtctacaccaggaactcctttagcctcagcttcttcgctagttacagcctcgact cctcctttgttggctccatcatcaactcaaactatggtaccagccccagttccgtcagct attccgagccctgcttcgacacagacactgaccttggccccagctttgacatcccctctt ggcagttcgtctccatctcagacacactcattgggaacagggaacccccagggagccttt tcagctcagaccctgtcattgactcctgcatcatccctagtaccaactccagctcagacg ttgtctttggcaccaggaccaccacttggtcccactcagacgctatctctggcttcccca ccccctctggctccagcttctccaatgggctcagcaccagctcacacactgactttggct ccagtatcatcatcatcatcatcatcatcatcatcatcttcttcgctcatggctccagct tcagtgcagacactgaccttgagccctgctccagtttcgatgcctaccttgagcccagct gcagctcagactctagcactggctccagtctcaacacaggtcccagcttcccaggcatct tcccttgtggtttcggcttctggagcagctcccttgcctgtcaccatggtatctcggctg actgttcccaaggatgagcctgaaacattgacattgcgctctggtccccctagccctccc tccactgctacctcgttcagtggtccccggcctcgacgccagcccccaccaccacctcgt tcccctttctatctggactctctggaggaaaagcggaagcgacagcggtctgaacgcctg gaacggattttccaacttagcgaggctcatggggccctggcacccatgtatggaactgaa gtcctggatttctgtaccctgccccaacctgttgccagtcctatcggccctcgttctcct ggccccagccaccccaccttttggacttatactgaagctgcccgtcaggctgtactgttt ccccagcaacgactagaccagctatcagaaatcattgagaggttcatctttgtcatgcct cctgtggaggcacctcccccttccctgcatgcctgccacccacctccttggctggcccca cgtcaggcagccttccaggagcaattggcttgtgagctctggccccgggctcgtcctttg caccgtattgtgtgtaatatgcgcacccagtttcctgacttgaggcttatccagtatgat tgtgggaagttgcaaacgttggcagtattgttgcgacagctcaaggcagagggccacagg gtgctcatatttacccaaatgacacgaatgctggatgtattggagcagtttctcacctat catggccacctctacttgcgtctggatggatctactagagttgaacagagacaggctttg atggaacggttcaatgcagacaaacgcatattctgcttcatcctttccactcggagtggg ggtgtgggtgtgaacctgacaggagcagacactgttgttttttatgacagcgactggaat cccaccatggatgcacaggcccaggatcgctgtcatcgaataggccagacccgagatgtt cacatctataggcttatcagtgaacggacagtggaagaaaacatcctgaaaaaggccaat cagaagagaatgttgggtgacatggccattgagggaggcaactttaccacagcctatttt aaacagcagaccatccgtgagttgtttgatatgcccctagaagagccatctggctcctct gtaccctctgcctctgaagatgatgaagagactgtggccagcaagcagacccatatcttg gaacaggcattgtgtcgggcagaggatgaagaagatatccgtgcagccacccaggccaaa gcagaacaggtggctgagcttgcagaattcaatgagaatgaaggctttccttctggtgag ggagaggagaccagtcgccctggggctgaggatgaggaggtatcccgagctgaacaggaa attgctgcccttgtagaacagttaacccccattgagcgctatgccatgaaattcttggaa gcctcactggaggaggtgagccgagaggagctcaaacaagcagaagaacaagtggaagct gcccgcaaggacctggatcaagccaaggaagaggtgttccggctgccccaagaggaggag gagggcccaggggctggggatgaggtttccagtgggactggtggaggcagccatcggcgc agtaagaaggccaaggcccctgaaaggccagggactcgtgtcagtgagcgtcttcgtgga gcccgggctgagactcaaggggcaaaccacactcctgtcacatctacccatcatgcccgc agcacctccacgccctctcgctgcagccctgccagggaaagagttccccgaccaacaccc aggcctcgacccactccagctccagctccagctccagctccagctccagctccagctcca gctccagctcctgctccagctcctgctcctgctgcagttcctgccccaactcctgtccct gtcccagtccccatttcagcccccaatccagtaaccatgcttcctatccatatcttgcct tctccccctcttcctccacagattcctccctcttgttcttctgcttgtacccctcctcct gcctgtacccctccaccagctcataccccacctccaacccaaacctctctcttaacccct tcctccccgctcctgcttggtttaccttctatgcctgtctctcccctagctaccaacgtc tccttaggcgtggggcctgaggcagagctgcgtgtgcaagccctggcatctactgagtca ctggttgatacagccagttctgagacttccccacttcctcttgtgccccctaaggatctg ttgccagttgctgttgagaacctgcccatgtcagagaagaacctttctctcacctcttct gcacctagcccaaccctggagactggcagtgtccccaacggtcaagagcaggaagtgcca gagcctgctgaggggactgtcctcacagtgctgcctgatggtgaggagatgcccagatgt ctgagtgagagcaatgggctggaactcccacccgcagcagcatctgatgagcaacttcag gaacccttggaggctgacaagagtgtagaagtggtagaggcccagaccccttcctccagt ccagagaagccacaggaactcattgctgctgaggtcacagccgcatcaacctcaacctca gccacctcctcacctgagggtccttcgcctgtccggccccctcggcgtcgcaccagtgct gatgtagaaatcaggggccagggggctggccggccagggcagcctccaggccctaaagtg cttcggaagctcccaggacgactggtgactgtggtagaggaaaaggaactggtgaggaga cggagacagcagcggggaactgccagcactctggtgcctgtcgtctctgagactggtgcc agcccgggaagcccatctacccacagcatgtcggggacagaatcctcaccccccaccggt gggccctgtgaagctgctcccccctccactttgcctaccccaacccagcaacccttcgta gctcgccgtcgcattgagctgggggtgactggtgggggcagtccagagaatggagaaggg gccttgcttaccatcactcctcctgctgtgaaacgtcggagggggaggccccccaagaag aacaggtctccagcagatgctgggcgaggggtggatgaggcgccttcctccacctcgaag ggaaaaaccaatggggctgatcctggggcggagacccttatcgttgcggaccctgtcctg ggaccccagcttattcctgagtcccaacctcttggaccccagccccttcatagacccgag cccatcatcctgtcacctgtggagaagagaaggcgcgggcggccccctaaggcacgcgat ttgcccattcctgggaccatttcgtctccaggggatggcagcttagagagccggacacag cctctcccgctgccaccacccctgccaccactcctaacctgtcccactgctactgtcgcc aacactgtcaccactctcaccatttcaacatccccacccaagcggaagcggggccggcct cccaagaatccaccatcgcctcggcccagccagctccctgtcttggaccgtgacagctcc tctgtccttgagagctgtggaatggggaggcggcggcacccccagggccagggggagagt gagggtagttcctctgatgaggatggaagccgccctctcacccgcctggcccgcttacgg cttgaagcagagggtatgcggggacgaaagagtgaagggtccatggtagtggctgtaatt caggatgacttggatttagcagagagtgggccagggggtttagagttgacaccacctgtg gcttcactgactccgaagctgcgttcgacccggctgcgtccagggtctctagtgcccccg ctagagacggagaaggtgcctcgcaaacgggcaggggccccagttgggggaggaactggg ctggcaaagcggggtcgtctgcagccccctagtcctctggcacctgagggctcagtagag gagtcagaggcagaagcctcaggtgaggacgaggaaggggatggaatcccacgtcgccga cctgccccccgcagacttggtggagccaccacccaaggggaccagcgcatcctgcgcagc agtgccccaccccacctgaccgtccctaccgttagtcacagaggccgcaaggccaagacg tga

DBGET integrated database retrieval system