Sorex fumeus (smoky shrew): 130045005
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Entry
130045005 CDS
T10594
Symbol
GTF2I
Name
(RefSeq) general transcription factor II-I isoform X1
KO
K03121
transcription initiation factor TFII-I
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03022
Basal transcription factors
sfum04022
cGMP-PKG signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130045005 (GTF2I)
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
130045005 (GTF2I)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfum03021
]
130045005 (GTF2I)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130045005 (GTF2I)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130045005 (GTF2I)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
130045005 (GTF2I)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTF2I
Motif
Other DBs
NCBI-GeneID:
130045005
NCBI-ProteinID:
XP_055993677
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MAQVAMSTVPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSMPQANRMSVDTVEIETLRKTVEDYF
CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVTFKHPENYDLATLKWILENKTGI
SFIIKRPFLEPKKHLGGRVMVPDAERSMLSAGGSCGPIKVKTEPTEDSGISLEMAAVTVK
EESEDPDYYQYNIQAGPSETDDVDDKLPLSKSLQGSHHTSEGNEGTEMEVPAEDSTQHVP
SETSEDPEVEVTIEDDDYSPPTKRPKSSEPPPPPVPEPVNAGKRKVREFNFEKWNARITD
LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE
RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE
ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR
PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF
ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVVSYLPPGMAGK
INTKALQSPKRPRSPGGNPKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE
FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF
RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSSKSPPRKINSSPSVNTTAS
GVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITI
NPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSES
EGPVIQESAEPSQLEAPATEEAKETDGNSQIKQEPDPTW
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggtcgcgatgtccaccgtgcccgtggaagacgaggagtcatcggagagcagg
atggtggtaaccttcctcatgtccgcgctcgagtccatgtgtaaagagcttgccaagtcc
aaggcggaggtggcctgcatcgccgtgtacgagacggatgtgttcgtcgtgggcactgag
cggggacgtgccttcgtcaacacccggaaagatttccagaaagattttgtaaaatactgt
gtcgaggaagaggagaaggctgcagagatgcataaaatgaagtctatgccgcaggccaac
cggatgagtgtggacacggtggagatcgagacgctcagaaagactgtggaggactatttc
tgcttttgctacgggaaagctttaggcaagtctaccgtggtgcctgtcccctacgaaaag
atgctccgggaccagtcagctgtggtcgtccaggggctccccgaaggagtcaccttcaag
caccctgagaactacgacctcgcgaccctgaaatggattttggagaataaaacggggatt
tcttttatcattaagagacctttcctggagcctaagaagcacctcggcggtcgtgtgatg
gtgccggatgccgagaggtccatgctgtctgcaggtggaagctgtggccccatcaaagtg
aaaactgaacccacagaagattctggaatttctctggaaatggcagctgtgacagtaaag
gaagaatccgaagatcctgattactatcaatataacattcaagcaggcccttctgaaact
gatgatgttgatgacaaactccccctttcgaagtctttgcaaggaagccatcatacttca
gaaggcaatgaaggaacagaaatggaagtaccagccgaagattctactcaacatgtccct
tcagaaacaagtgaggatcctgaagttgaggtgactattgaagacgatgattattctcca
cctaccaagagaccaaagagcagcgagccaccgcccccgccggtcccggagcctgtcaac
gctgggaagcggaaagtgcgcgagttcaactttgagaagtggaacgctcggatcactgat
ctacgcaaacaagtggaagagctgtttgagaggaaatacgctcaagccataaaagccaaa
ggccccgtgacgatcccgtaccctcttttccagtcgcacgtcgaggatctgtatgtggag
ggacttccagaggggatccctttccggcggccgtcgacgtacgggatcccccgccttgag
aggatcttactcgcaaaggagcgaatccgctttgtgattaagaaacatgagcttctgaat
tcgacacgggaagacttgcagctcgataagccagcttcaggagtgaaggaagagtggtac
gccaggatcaccaagttacgcaagatggtcgaccagctcttctgcaagaagtttgccgag
gccttggggagcaccgaagccaaggctgtcccttatcagaagtttgaggcgcacccgaat
gacctctacgtggaaggactgccggagaacattcctttcagaagcccctcgtggtacgga
atccccaggctggagaagatcatccaagtgggcaaccggattaagtttgttattaaaaga
ccagagctcctgacccacagcaccactgaagttacacagccgagaactaacacgccagtc
aaagaagattggaatgtcagaattaccaagttgcggaaacaagtagaagagatatttaac
ttgaaatttgctcaagctctgggactcaccgaggccgtgaaggttccgtaccccgtgttc
gagtcaaaccccgagttcctgtatgtggagggtctgcccgaagggattcctttccgcagc
cccacctggtttgggatcccaagactggagcgcattgtccgcgggagcaacaagatcaag
tttgtcgtgaaaaaaccggagctggttgtatcctacttgccgccgggaatggccggtaaa
atcaacacgaaagcgttgcagtccccgaaaagacctcgcagccctggggggaaccccaaa
gtgcccgagatcgaggtcaccgtggaaggtcctaataacaacaacccccagacctctgcc
gtgcgcacccccacccagaccaatggctccaacgtgcccttcaagcctcgagggagggag
ttttcctttgaggcctggaatgccaaaatcacagacctcaagcagaaagtcgaaaatctt
ttcaatgagaaatgcggggaggcgctcggcctgaagcaagcggtgaaagtgcccttcgcc
ttgtttgagtcgttccccgaggacttctatgtggagggcctgcccgagggcgtgcccttc
cgccgcccgtccacctttggcattccccggctggagaagattctccgaaacaaagccaag
atcaagttcatcatcaagaaacccgaaatgttcgagacggcaattaaggagagcacgtcc
tcctccaagagccctccgaggaagataaactcgtcccccagtgtcaacaccactgcatcc
ggcgttgaggatctcaatatcatccaggtgaccattccagatgatgataatgaaaggctg
tccaaggtggagaaggccaggcagctgagagagcaggtcaatgatctcttcagccggaag
ttcggtgaagcgattggcatgggcttccccgtgaaggtgccctaccggaagatcaccatc
aaccctggctgcgtggtggtggacggcatgccccccggcgtgtccttcaaggcccccagc
tacctggagatcagctccatgagaaggatcttagactctgcagagttcatcaaattcacg
gtcatcagacccttcccggggctggtgatcaataaccagctggttgaccagagcgaatct
gaaggcccagtgatacaagagtcggctgagcccagccagctggaggcaccggccacagaa
gaagccaaggagactgacgggaactcgcagatcaagcaggagccggaccccacgtggtag
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