Sorex fumeus (smoky shrew): 130045113
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Entry
130045113 CDS
T10594
Symbol
NCSTN
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04330
Notch signaling pathway
sfum05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130045113 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
130045113 (NCSTN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
130045113
NCBI-ProteinID:
XP_055993811
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MAAVGGGSAAGPGGPRLLHLLCLCALLAGLCGGNSVERKIYVPLNRTAPCVRLLNATHQI
GCQSSLSGDTGIIHVVEKEDDLQWVLSSGPNPPYMVLLEGALFTRSLMEKLKDSSGRIAG
LAVSLTRPLPAAGYSPSVQCPNEGFGVYSDVYGPEFAHCRDLPWNPHGDGLAYEDFNFPI
FLLEDENETEVIKQCFRTHNLGQNGSAPTFPLCAMQLSAHMHAVLSTATCMRRSALQTSF
SINPEIVCDPLSDFNVWSLLRAVNISGGLAPSDRLVVAATRLDSRSFFWNVAPGAESAVA
SFVTQLAAAEALQKAQDVSTLPRNVMFVFFQGETFDYIGSSRMVYDMETGRFPVRLDNIH
TFVELGQVALRDSLELWMHTDPVSQKNDSVRNQVEALLTTLEKSSQGVPVALQRLNQTQP
LPPSSLQRFLRARNISGVVLADHRAAFHNRYYESVYDNPDSINVTYPQGQSPEESLNHVT
DTAKALADVATLLARALYQLAGGDQFSASIEADPKTVTRLLYGFLVRPNNSWFQSFLRQD
LRPFLGDGPPQHYIAVSSPTNTTYLVQHALANLTGTALGLTREQCQDPSQVPGEDKERFE
YMWVQGPLDGNHSERLPHCVRSTVRLARALSPAFDLDQWGSTEYSTWTESRWKDIHARIF
LVASRELELITLTVGLGILVLSLAITYCVNAKAGVLFMAPREPGAVSY
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtggggggcggctccgcggccggccccgggggtccccgcctcctgcacctg
ctgtgcctgtgcgccctgctggcaggtctgtgtgggggcaactccgtggagaggaagatc
tacgtgcccctgaaccggaccgcgccctgcgtccgcctgctcaacgccacccaccagatc
ggctgccagtcgtcgctcagcggggacacgggcatcatccacgtggtggagaaggaggac
gacctgcagtgggtgctgagcagcggcccgaaccccccctacatggtgctgctggagggt
gctctcttcaccaggagcctgatggagaagctgaaggacagcagcggccgcatcgcgggc
ctggctgtgtccctgacccggcccctccccgccgccggctactcccccagcgtgcagtgc
cccaacgagggcttcggtgtctactcggacgtttacgggcccgagtttgctcactgccgg
gacctgccgtggaacccccacggtgacggcctggcctatgaggatttcaactttcccatc
ttcctcctggaggacgaaaatgagacggaggtcatcaagcagtgcttccgcacccacaac
ctcggccagaatggctcggcccccaccttcccgctgtgcgccatgcagctgtcggcacac
atgcacgccgtgctcagcacggccacctgcatgcgtcgcagcgccctgcagacgtccttc
agcatcaacccagagatcgtctgcgacccgctgtcggacttcaacgtgtggagcctgctg
cgggccgtcaacatctcggggggcctggcgccttcggacaggctggtggtggccgccacc
cggctggacagccggtccttcttctggaacgtggcccctggggcagagagcgccgtggcc
tccttcgtcacccagctggccgcggcagaagcgctgcagaaagcccaggacgtgtccacc
ctgccccggaacgtcatgtttgtcttcttccagggggagacattcgactacatcggcagc
tcgaggatggtgtacgacatggagacgggcaggttccccgtgcgcctggacaacatccac
accttcgtggagctgggccaggtggccctcagggactctctggagctctggatgcacaca
gaccctgtgtcgcagaagaacgattccgtgaggaaccaggtggaggcgctcctgaccacg
ctggagaagagcagccagggcgtgccggtggccctgcagaggctgaatcagacccagccc
ctcccgccctcctcgctgcagcgcttcctgcgggcccggaacatctcgggggtggtcctc
gctgaccacagggctgccttccacaaccggtattacgagagcgtgtacgacaaccccgac
agcatcaacgtcacctacccgcagggccagagcccggaggagagcctcaaccacgtgacc
gacacggccaaggccctggcggacgtggccacgctgctggcacgggccctgtaccagctg
gccggaggtgaccagttcagcgcgtccatcgaggccgatcccaaaacggtcacccgcctg
ctgtacggcttcctggtgagacccaacaactcgtggttccagtccttcctccggcaggac
ctgcgccccttcttgggggacggccccccacagcactacatcgcggtctccagccccacc
aacaccacctacctggtccagcacgccctggccaacctgacgggcaccgccctgggcctg
acccgggagcagtgccaggaccccagccaggtccccggggaggacaaggagcggttcgag
tacatgtgggtgcaggggcccctggacggcaaccacagtgagcggctcccgcactgcgtc
cgctccaccgtgcgcctggcccgggccctgtcgcccgccttcgacctggaccagtggggc
tccaccgagtactccacgtggaccgagagccgctggaaggacatccacgcccgcatcttc
ctggtggccagcagggagctagagctcatcacgctgactgtggggctgggcatcctcgtg
ctgtcgctggccatcacctactgtgtcaacgccaaggccggcgtcctgttcatggcgccc
cgcgagcccggcgccgtgtcctactga
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