Sorex fumeus (smoky shrew): 130045199 Help Entry 130045199         CDS       T10594                                  Symbol THOC1 Name (RefSeq) THO complex subunit 1   KO K12878   THO complex subunit 1 Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum03013   Nucleocytoplasmic transport sfum03040   Spliceosome Brite KEGG Orthology (KO) [BR:sfum00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     130045199 (THOC1)   09122 Translation    03013 Nucleocytoplasmic transport     130045199 (THOC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sfum03019]     130045199 (THOC1)    03041 Spliceosome [BR:sfum03041]     130045199 (THOC1) Messenger RNA biogenesis [BR:sfum03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      130045199 (THOC1) Spliceosome [BR:sfum03041]  Complex C   Other components    EJC/TREX     130045199 (THOC1)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     130045199 (THOC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  efThoc1 Death bDLD3 Motif Other DBs NCBI-GeneID:  130045199 NCBI-ProteinID:  XP_055993890 LinkDB All DBs Position Unknown AA seq 657 aa AA seqDB search MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDLCDTIFTFVEKNV ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS LQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVVRKRTAPE DFLGRGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKVLAPYLELKDSEIR QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALTKSGLSDLAESLTNDNETNS NT seq 1974 nt NT seq  +upstreamnt  +downstreamnt atgtctcccacgccaccgctcttcagtttgcccgaagcgcggacgcggttcacgaagtct accagagaggccttgaacaacaaaaacatcaagccattgttaaataccttcagccagtta cctgggagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgtcctagaa gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt gggggagtaactgaaggtatttgtactgcctctacaccttttgtattgttgggagatgtt ttggattgtcttcctttggatctctgtgacacaatattcacttttgtggaaaaaaatgtt gctacttggaagtctaacacattctattctgctgggaaaaattatttactacgtatgtgc aatgatctcctaagaagattatcaaaatctcagaatactgtcttctgtggacgaattcag ctctttttggccagactttttcctttatcagagaaatcaggtcttaacttgcagagccaa tttaacctggaaaatgtcactgttttcaataccaacgagcaggaaagcacactgggtcaa aagcacactgaggacagagaggaaggaatggatgtcgaagaaggtgaaatgggagatgat gaagctccaacaacttgctccattccaattgattacaacctgtacagaaaattctggtca cttcaggattacttcaggaatcctgtgcaatgctatgagaaggtttcctggaaaactttt ctcaagtattctgaagaagtcttagctgtatttaaaagttacaaactagatgatacccag gcttcaaggaaaaagatggaagaattaaaaacaggaggagagcatgtatattttgcaaaa tttttaacaagtgaaaagctgatggatttacaactgagtgacagtaattttcgtcgtcac atcttgttgcagtatctcattttatttcaatatctcaaggggcaggtcaaattcaaaagt tctaactatgttttaactgatgaacaatcactctggattgaagataccacaaaatcagtt tatcaactactatctgaaaacccacccgatggagaaagattttcaaagatggtagagcat atattaaatactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg aaagagagaacatccgataccaagccaacaagagtagtacggaagagaacagcaccagag gactttctagggagaggacctaacaaaaagattctgatgggaaacgaggagttaacaagg ctttggaatctatgtcctgataatatggaagcctgtaaatcagaaacaagggaatatatg ccaacactggaggaattttttgaagaagccattgaacaagcagatcctgaaaatatggtt gaaaatgaatataaggcagtgaacaattccaattatggttggagagccctgagactatta gcacggagaagtcctcattttttccagccaaccaatcagcagtttaaaagtttgccagaa tatcttgaaaacatggtgattaagctagcaaaggaattaccacctccttctgaagaaata aaaacaggagaggatgaagatgaggaagataatgatgctttactaaaggaaaacgaaagc cctgatgttcggcgagataaacctgtaacaggggaacagatagaggtatttgccaacaaa ctgggtgaacagtggaaggttttggctccctacttggaactgaaagactcagaaatcaga cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctactggttgcctgg caagatcaagagggggtgcatgcaacacctgagaatctgattaatgcactgactaagtct ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag

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