Sorex fumeus (smoky shrew): 130045286
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Entry
130045286 CDS
T10594
Symbol
RECQL5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130045286 (RECQL5)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130045286 (RECQL5)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
130045286 (RECQL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecQ5
DEAD
SRI
Helicase_C
RecQ_Zn_bind
ResIII
KIX_2
TFIIS_M
YmgM
Motif
Other DBs
NCBI-GeneID:
130045286
NCBI-ProteinID:
XP_055994027
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSARRAAPPDRERRVRSTLKKVFGFEAFKTPLQEQATMAVVKGDKDVFVCMPTGAGKSLC
YQLPALLAKGITLVVSPLIALIQDQVDHLLALKVCVSSLNSKLSAQEKKELLSDLERDQP
RTKLLYITPEMAASASFQPTLNSLLSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRT
RLAQTPCVALTATATPQVQEDVFATLRLKQPAATFKTPCFRANLFYDVQFKELLSDPYAN
LRDFCLKALGKKADNGVLAGCGIVYCRTREACEQLAIELSYRGVNAKAYHAGLKASERTL
VQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGQPSWCR
LYYSRSDRDQVSFLIRKEVAKLQEKRGNKPSDKASVLAFEALVAFCEESGCRHAAIAKYF
GDAVPACPKGCDYCRSPAAVRRQLDALERSGGRTPSTSVGPTRTGNFDPELYEGGRRGYG
GFSRYDEGSGGSGDEARDEAQKREWNLFYQRQMSLRKGKDPKTEEFVPPDEDCPLKEASS
RKIPKLTVKAREHCLRLLEEALSDNCQATGSSIGPTLQAEAVELEHQAFRSARLATVYKA
SMLKKVAEIHRASQNRQPYCVPDTTGSRGAQPAPPEPDEYDIPPASHSLKPKRVGAGFPR
GAHAFQTASELLEKTQAESPRPEKGDPQEPPSQPHRPQDEDSSESLPGPPEEIPQSSAHS
GGPSPSTKASGASRAKGRPKKQQLLASAALRDSQDITRFLAPPAPAGTPGEKGLGAPGHT
ATPSRAEECTRDGLRDQGPPEGQPSPTQEPQRAKRPRPKQESPGSGTQKRQCTPAKSPGA
EGCVGTSKPRAPGDSEPSAPSVSLKEAAGVVVRCLTPFYKEGKFASKELFKGFARCLSHS
LAQQPSLGRSMKQQAQHLIEQFFHGRARCESEAEWHDLWGPRR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgccgcgccgcgccgcccgaccgcgagcggcgagtccggagcacgctgaag
aaagtctttgggttcgaggcgtttaagacgcctctgcaggagcaggcgaccatggcggtg
gtgaaaggtgacaaggacgtctttgtgtgcatgcctacaggcgcaggcaagtccctgtgc
tatcagcttcctgccctgctggccaaaggcatcacccttgtggtctcgcctctcattgct
ttgattcaggaccaagtggaccacctgctggccctgaaggtgtgcgtgagctctctgaac
tccaagctctcagcccaggagaagaaggagctgctctccgacctggagcgcgatcagccc
cgcaccaaacttctgtacatcacgccagagatggcggcttcggcctccttccagcccacc
ctcaactccctactgtcccgccacctgctctcctacctggtggtggacgaagctcactgt
gtttcccagtggggccatgacttccggcccgactacctgcgtctgggtgccctgcgcacc
cgcctcgcccagactccatgtgtggctctgacggccacggccacgccacaggtccaggag
gatgtgtttgccaccctgcgcctgaagcaacccgccgccaccttcaagaccccctgcttc
cgagccaacctcttctatgatgtgcagttcaaggagctgctttctgacccctacgcaaac
ctcagggacttctgcctgaaggctcttgggaagaaggctgataacggggtgttggccggc
tgtggcattgtctactgccgaacccgagaggcctgcgaacagctggccatagagctcagt
tacaggggtgtgaatgccaaggcataccatgcagggttgaaggcttcagaaaggacgctg
gtgcagaatgagtggatggaggagaaggtccctgtgattgtcgccaccattagcttcggg
atgggagtggataaagccaatgtcaggtttgtggcccactggaacatcgccaaatccatg
gctggttactaccaggagtcgggccgggcaggcagggacgggcagccctcgtggtgccgt
ctctattactccaggagtgacagggaccaagtcagcttcctcatcaggaaggaagtagcg
aaactccaggaaaagagggggaacaaaccatctgacaaagcttctgtgctggccttcgag
gccctggtggccttctgtgaagaatcggggtgccgccacgctgccatcgccaagtacttt
ggggatgctgtgccagcctgccccaagggctgcgactactgccggagccccgcggccgtg
cgcaggcagttggacgccctggagcgcagtggtggccgcacccctagcaccagcgtgggg
cccacccggaccggcaacttcgacccagagctctacgagggtggccgcaggggctacgga
ggcttcagcaggtacgatgaaggctctggaggcagcggggacgaggcccgagacgaggcc
cagaagcgggagtggaacctcttctaccagaggcagatgagcctgcgcaagggcaaggac
cccaagacggaagagttcgttcccccagatgaggactgcccgctgaaagaggcctccagc
aggaagatccccaagctgaccgtgaaggcccgggagcactgcctacgcctcctggaggag
gctctgagcgacaactgccaggccacaggctcttctataggacccactctccaggctgag
gcagtggaactggagcaccaggcattccggagtgccaggctggccaccgtgtacaaggcc
agcatgctgaagaaggtggccgagatccacagagcctcccagaaccggcagccctactgt
gtgccagacaccaccggcagccgaggggcccagcccgcacccccagagcctgatgaatac
gacatcccgcccgcctctcactcgctcaaacccaagcgggtgggagccgggttccccaga
ggcgcccacgctttccagacagcgtctgagctgctggagaagacacaggccgagagcccc
aggcccgagaagggggacccacaggagccccccagccagccacacagaccccaggatgag
gacagcagtgagtccctcccagggcctccagaagagatcccccaaagcagcgcacacagt
gggggtccctcccccagcacgaaggcatcaggagcatccagggctaagggccgccccaag
aagcagcagctcctggcctcggcagccctcagggactcgcaggacatcacccgcttcctg
gccccacccgcacctgctggcacccctggggagaaggggctgggtgctccgggacacaca
gctaccccctctcgggctgaggaatgcaccagggatgggctgagagaccagggcccccct
gaaggccagcccagccccacacaggagccccagagggccaagcggcccagacccaagcag
gagagccctggcagcggaacccagaagaggcagtgcacccctgccaagagccccggggct
gagggttgtgtcggcacctcgaaacccagagccccgggggacagtgagccctcagctccc
agcgtgtccctgaaggaggccgccggcgtcgtggtccgatgcttgacccccttctacaag
gagggcaagtttgcatccaaggagctgttcaaaggctttgcccggtgtctgtcacattcg
ctggcccagcagccctctctggggaggagcatgaagcagcaggcccagcacctcatcgag
cagttcttccacggccgggcgcggtgcgagagcgaagccgagtggcatgacctgtggggc
ccccggaggtga
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