Sorex fumeus (smoky shrew): 130045330
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Entry
130045330 CDS
T10594
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130045330 (TSEN54)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
130045330 (TSEN54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
130045330
NCBI-ProteinID:
XP_055994111
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MEPEPAAVEVPAGRVLSAQELLAARSRPQKLPQRSHGPKDFLPDGSAAQAERLHRCRQEL
WQLLAEERVERLGSLVAAEWRPERGVVELKTPAGKFWQTMGFSEQGRQRLHPEEALYLLE
CGSIQLFHQELPLSVQEAYQLLLAGDSVTFLQYQVFSHLKRLGYVVRRFCPSAILSPYER
QLNLDGSAQYSEDRSGRRKRRSSSSRSVPKKLKALERPLQGSSGTPANLAAASPAPCSLD
SPEDKPQELSPVAGPSQLPGSQDPWAGRVENGVQGACKPRWNFEQIAFPNMAPDSRHTRL
PAPAPELLPAHVEARATDAEAWCHQLNQRKDKPSEQSREPMAEARPWWRELNADPEVQGC
SGWREYKELLRRRLLQEPPSRPLHLWHQPVTPLLSPNQADSPATILQQVTILQTTHLAHD
GARLLTESGGLEISFDVYQADAVATFRKNNPGKPYARMCVSGFDEPVPDLRTLKRLSYQS
GDVPLIFALVDHGDISFYSFRDFTLPRDLDQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgagcccgcggcagtggaggtccccgccggacgcgtgctcagcgcccaggag
ctcctcgccgcccgctcgcggccccagaagctgccccagcgctcgcatggccccaaggac
ttcctccccgacggctcggccgcgcaggccgagcggctgcaccggtgccgccaggagctc
tggcagctgctggccgaggagcgcgtggagcgcctgggcagcctggtggcggccgagtgg
aggccggagcgcggcgtggtggagctgaagacccccgcgggcaagttctggcagaccatg
ggcttctccgagcagggccggcagcggctgcaccccgaggaggccctgtacttgctggag
tgtggctccatccagctcttccaccaagagctgccgctgtccgtccaggaggcttaccag
ctgctgctggccggcgactcggtgactttcctgcagtaccaggttttcagccacctgaag
agactgggctacgtggttcgccgattctgcccaagtgccatcctgtccccttacgagcgg
cagctgaaccttgacggcagcgcccagtactcggaggatcggagcggcaggaggaagagg
aggagctccagctctcggtctgttcccaagaagctcaaggccctggagcgccccctgcag
gggtcgtctgggacacctgccaacctggccgctgccagcccagctccctgtagcctggac
agcccagaggacaagccccaggagctgagccctgtggccggcccctcacagcttccaggc
tcccaggacccctgggccggccgggtagagaacggggtccagggggcgtgtaagcctcgc
tggaactttgagcagatcgccttccccaacatggcccccgacagccgccatacgcgcctg
ccggccccggccccagagctgctcccagcccacgtggaggcccgtgccactgacgccgag
gcctggtgccaccagctcaaccagcggaaagacaagccgtctgagcagtcacgggagccc
atggccgaggcccggccctggtggcgggagctgaacgctgaccccgaggtgcagggctgc
tcgggctggcgggagtacaaggaattgctgcggcggcggctcctgcaggagccccccagc
cgccccttgcacctgtggcaccagcctgtcacacccctgctgagcccaaaccaggctgat
tctccagccaccatccttcagcaggtcaccatactgcagacgacacaccttgcccacgat
ggtgcccggctgctgacggagtcagggggcctggagatcagttttgatgtgtaccaagct
gatgccgtggccacgttccggaagaataaccctggcaagccctatgcccggatgtgcgtt
agtggatttgatgagccggtcccagacctccgcaccctcaagcgattatcctaccagagc
ggggacgtccctctgatctttgccctggtggatcacggcgacatctccttctacagcttc
agggacttcactctgcccagggacctggaccagtga
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