Sorex fumeus (smoky shrew): 130045338
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Entry
130045338 CDS
T10594
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130045338 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130045338 (MYO5B)
04131 Membrane trafficking [BR:
sfum04131
]
130045338 (MYO5B)
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130045338 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130045338 (MYO5B)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130045338 (MYO5B)
mRNA cycle factors
P-body specific factors
130045338 (MYO5B)
Membrane trafficking [BR:
sfum04131
]
Others
Actin-binding proteins
Myosins
130045338 (MYO5B)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130045338 (MYO5B)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130045338 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
nSTAND3
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
130045338
NCBI-ProteinID:
XP_055994121
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MSLSELYSQYTKVWIPDPEEVWRSAELTKDYQDGDTSLQLSLEDGTVQEIPIDVQSNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQAADERNYHIFYQLCAVASLPEFKELELTCAEDFFYTSQGGDTSIEGVD
DAKDFEKTRQAFTLLGVRESHQISIFKIIASILHLGNVEIQAERDGESCSISPQDEHLDT
FCRLLGVEQSQMKHWLCHRKLVTTAETYVKTMSLQQVVNARDALAKHLYAQLFGWIVEQV
NEALRSTLKQHAFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHAASQHFQK
PRMSNTSFIVIHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFHDDKDPVP
ATTAASKGSSSKINIRSARPPLKASNKEHKKTVGHQFRASLHLLMETLNATTPHYVRCIK
PNDEKLPFHFDPRRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLVRKKDLANT
DKKAVCRSVLESLLKDPDKFQFGRTKIFFRAGQVAHLEKLRANRFRTATIMIQKTVRGWL
QRVRYRRLRGATLTLQRYCRGHMARRLAEHLRRTRAAVVLQKQYRMHRARQSYRRVRDAI
VVIQAFTRGMFVRRTYLQVLTEHKATVIQKHVRGWMARKRFQQLRDAAVLIQCAFRMLKA
RRALKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAATSTHSMEV
ARLKKELAQYQRSREEDSSPRLQSELESLRDELRRAQDERTVLEDEHAREKSELRKRVAE
LEQENALLKDEKEQLNLQIRNQSTDQSARNSAQGEALAAKELEEERARYQNLVKEYSRLE
QRYDTLRDEMTIIKQTPGHRRNPSNQSSLESDSNNPSISTSEVGDTEDTLQQVEEAGLEK
AAMDLTVFLKLQKRVRELEQERRKLQAQLEKREQDSQQGQVDPAKNEADLAQDEDLAYNS
LKRQELESENKKLKNDLNELRKAVAAHAAQGSPPPGSPDGYSLLLNQLKLAHEELEVRKE
EVLILRTQIVSADQRRQSGKNMDINARTSWPNSEKHVDQEDAIEAYHGVCQTNRKTEDWG
YLNEDGELGLAYQGLKQVARLLEAQLQEQSREHAREAEELRAQVEALREELAGQQQTFCQ
ALLLSPDAQVEFGVQREISRLTSENLDLKEVVEKLEKNERKLKKQLKIYMKKAQDLEATQ
ALAQSDRGRQELHRQVTVQRKEKDFQGMLEYHHDDEALLVRNLVTELKPQALAGAVPCLP
AYILYMCVRHADYTNDDVKLHSLLTATINGIKRVLKKHGDDFEMTSFWLANSCRLLHCLK
QYSGDEAFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIRVAEGVLQPMIVSAM
LENESIQGLSGVKPMGYRKRSSSMVDGENAYCLEAVIRQMTAFHTVMGDQGLDPEIILQV
FKQLFYMINAVTLNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGRNLQQSGAAQTLEPLI
QAAQLLQLKKKTPEDAEAICSLCTALSTQQIVKILNLYTPLNEFEERVTVAFIRTIQAQL
QERNDPPQLLLDFKHMFPVVFPFNPSSLTMDSIHIPASLHLEFLSEV
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcagcgaactctacagccagtacaccaaggtctggatccctgaccctgaggag
gtgtggcgctcggccgagctgaccaaggactaccaggacggggacacgagcctgcagctg
agcctggaagatggaacggttcaggaaatccccattgatgtccagagcaaccagctgccc
ttcttgcggaacccagatatcttggtgggtgagaatgacctcactgccctaagctatctt
cacgagcctgcagttctgcataatttgaaggtccggttcctggagtccaaccacatctac
acatactgcggtatcgtgcttgttgccatcaatccttacgaacagttgccaatctacgga
caagatgtcatctatgcgtacagcggccagaacatgggggacatggacccccacatcttt
gctgtggcggaagaggcctataagcagatggccagagatgagaagaaccagtccatcatc
gtcagcggcgagtcaggggccggcaagaccgtgtcggccaagtatgccatgcgctacttt
gccacggtgggtggctcagccagcgacaccaacatcgaagagaaggtgctggcatccagc
cccatcatggaggccattggaaatgccaaaaccacacgcaatgacaacagcagccgcttt
gggaagtacattcagattggcttcgacaagaggtaccacatcatcggggccaacatgaga
acctacctgttggagaagtccagagtggtcttccaggctgctgacgagaggaactaccac
atcttctaccagctgtgcgcagtggccagcctccccgagttcaaagagctggagctcacc
tgtgcagaggacttcttctacacgtcgcagggaggggacacgtccatcgagggtgtggat
gatgcaaaggactttgagaaaacacgccaggccttcaccctccttggagtgcgagagtcc
catcagataagcatttttaagataattgcttctatcctgcacctcggaaacgtggaaatc
caggcagagcgtgatggcgagtcctgcagcatctcgccccaggatgaacacctggacacc
ttctgccgcctgctgggcgtggagcagtcgcagatgaagcactggctgtgccaccgcaag
ctggtgaccacggcggagacctacgtgaagaccatgtccctgcagcaggtggtcaacgcg
cgcgacgccctggccaagcacctgtacgcacagctgttcggctggatcgtggagcaggtg
aacgaggccctgcgcagcaccctcaagcaacacgccttcatcggggtcctggacatctac
gggttcgaaacctttgaggtcaacagctttgagcagttctgcatcaactatgccaacgag
aagctccagcagcagttcaactcgcacgtcttcaaactggagcaggaagagtacatgaag
gagcagatcccttggactctgattgatttctacgacaaccagccctgcatcgacctcatc
gaggccaagctgggcatcttggacctgctggatgaagagtgcaaggtgcccaaagggact
gaccagaactgggctcagaagctgtatgaccgacacgcggcaagccagcacttccagaaa
ccccgcatgtccaacacctccttcatcgtcatccacttcgccgacaaggtggagtacctc
tccgacggcttcctggagaagaatcgggacacggtgtacgaggagcagatcaacatcctg
aaggccagcaagttcccgcttgtggccgacttgttccacgatgacaaagaccccgtccct
gccaccaccgctgccagtaagggctcgtcctcgaagatcaacatccgctcggccagaccc
cccctgaaggcctccaacaaggagcacaagaaaaccgtgggccaccagttccgtgcctcc
ctgcacctgctcatggagactctgaacgccacgacaccacactacgtccgctgcatcaag
cccaacgacgagaagctcccattccactttgaccccaggagagcagtgcagcaactccgg
gcgtgcggggtgctcgagaccatccggatcagtgcggccggctacccgtccaggtggacc
taccatgacttcttcaaccgctaccgggtgctggtgaggaagaaagacctggccaacacg
gacaagaaggccgtctgcaggtcggtcctggagagcctcctcaaggatcccgacaagttc
cagttcggccgcaccaagatcttcttccgggcaggccaggtggcccacctggagaagctg
cgggccaacaggttccggacggccaccatcatgatccagaagaccgtgcggggctggctg
cagagggtgcggtaccgccggctgcggggggccaccttgacgctgcagcgctactgccgg
gggcacatggctcgcaggctggctgagcatctgcgcaggacccgggcggccgtggtgctc
cagaagcagtaccgcatgcacagggcccgccagtcctaccgacgtgtgcgtgacgccatt
gtggtcatccaggccttcacccggggcatgttcgtgagaagaacctacctccaggtcctc
acggagcacaaggccaccgtcatccagaagcacgtgcgtggctggatggcacgcaagcgc
ttccagcagctccgggatgccgccgtgctgatccagtgcgccttccggatgctcaaggcc
aggcgggctctgaaggccctcaagatcgaggcccgctcggccgagcacctgaaacgcctc
aacgtgggcatggagaacaaggtggtccagctgcagcgcaagatcgatgaccagaacaag
gagttcaagacgctgtcggagcagctgtcagcggccacgtccacgcactccatggaggtg
gccaggctgaagaaggagctggcccagtaccagcgtagccgcgaggaggacagcagcccc
cggctgcagagcgagctggagagcctgcgggacgagctgcggagagcgcaggacgagcgc
acggtcctggaggacgagcacgccagggagaagagcgagctgagaaagcgcgtggccgag
ctggagcaggagaacgcgctcctcaaggacgagaaggagcagctcaacctccagatccgg
aaccagtccacagaccagtctgcccggaactcggcccagggggaggccctggcggccaag
gagctggaggaggagcgagcccgctaccagaacctcgtgaaggagtactcgcggctcgag
cagagatacgacaccttgcgggatgagatgaccatcatcaagcaaaccccaggccatcgg
cggaacccatccaaccaaagtagcttagaatcggactccaataacccgtccatctccacg
tctgaggttggagacacagaggacaccctccagcaggtggaggaagccggcctggagaag
gccgccatggacctgaccgtcttcctgaagctgcagaagagggtgcgggagctggagcag
gagcggaggaagctgcaggcacagctggagaagcgcgagcaggacagccagcagggccag
gtggatccagccaagaacgaggcggacttggcccaggacgaggatctggcctacaacagt
ctgaagaggcaagagctggagtcggagaacaagaagctgaagaacgacctgaatgagctg
aggaaagccgtggccgcccacgccgcccagggcagccccccacccggctcccccgacggc
tacagcctgctgctcaaccagctcaagctggcgcacgaggagctggaggtgcgcaaggag
gaggtgctcatcctgaggacacagatcgtcagcgccgaccagcgccggcaatccgggaag
aacatggacatcaatgccaggacgagctggcccaacagcgagaagcacgtggaccaggag
gacgccatcgaggcctaccacggggtctgccagaccaacagaaagacagaggactggggc
tatttgaacgaagacggggagctcggcctggcctaccagggcctaaagcaagttgccagg
ttgctggaggcgcagctgcaggagcagagccgcgagcacgcgcgggaggccgaggagctg
cgggcgcaggtggaggcgctgcgggaggagctggcgggtcagcagcagaccttctgccag
gcgctgctgctctcgcccgatgcccaggtggagttcggcgtccaacgggagatctcgcgg
ctgaccagcgagaacctggacctcaaagaagtggtggagaagctggagaagaacgaacgc
aagctcaagaagcagctgaagatctacatgaagaaagcgcaggacctggaggcaacccag
gcactggcccagagcgacagggggcggcaagagctgcacaggcaggtgaccgtgcagcgg
aaggagaaggacttccagggcatgctggagtaccaccacgacgacgaggccctgctcgtc
cgcaacctggtcacagagctgaagccgcaggcgctggcgggcgccgtgccctgcctgccc
gcctacatcctgtacatgtgcgtgcgacacgccgactacaccaacgacgacgtcaagctg
cactcactgctcacggccaccatcaacggcatcaagcgggtcctcaagaaacacggtgac
gacttcgagatgacgtccttctggctggccaacagctgccggctcctgcactgcctgaag
cagtacagtggggacgaggccttcatgacgcagaacacggccaagcagaacgagcactgt
ctgaagaactttgacctcactgagtaccgccaggtgttgagtgacctgtccatccagatc
taccagcagctcatcagggtggccgagggcgtcctgcagcccatgatcgtgtcggcaatg
ctggagaacgagagcatccagggcctgtcgggggtgaagcccatgggctaccggaagcgc
tcgtccagcatggtggacggcgagaacgcctactgcctggaggccgtcatacgccagatg
accgccttccacaccgtcatgggcgaccagggcctggaccccgagatcatcctgcaggtg
ttcaagcagctcttctacatgatcaacgccgtgaccctcaacaacctcctgctgaggaag
gacgtctgctcctggagcacgggcatgcagctcaggtacaacatcagccagctggaggag
tggctgcggggccggaacctgcagcagagtggggcggcccagacccttgagcccctcatc
caggcagcacagctcctgcagctgaagaagaagacccccgaggacgctgaggccatctgc
tccttgtgcacggccctcagcacccagcagattgtcaaaattttaaacctttatacgccc
ctgaatgaatttgaagaaagggtaacagtggcctttatacgaacgatccaggcacagctt
caagagcggaatgaccctccacagctgctgctcgacttcaagcacatgtttccggttgtg
ttcccattcaatccctcttctctgaccatggactccatccacatcccagcgagtctccat
ctggagttcctcagtgaggtctga
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integrated database retrieval system
