Sorex fumeus (smoky shrew): 130045346
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Entry
130045346 CDS
T10594
Symbol
TGIF1
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130045346 (TGIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130045346 (TGIF1)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
130045346 (TGIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
130045346
NCBI-ProteinID:
XP_055994138
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MKSKKGVVAVSGSETEDEDSMDIPLDLSSSAGSGKRRRRGNLPKESVQILRDWLYEHRYN
AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKISEA
SSVESAVGIKNFMPALEESPFHSCTAGLNPALGGPLSPKPSSPGSILARPSVICHTTVTA
LKDVPFSLCQPVGVGQNTEIQQVAANNFIDTSLMYPDDTCKSGPSTNTQSGLFNTPPPTP
PDLNQDFSGFQLLVDVALKRAAEMELQAKLTA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaagaaaggtgttgttgcggtgtctggcagtgagaccgaggatgaggacagc
atggacatccctctggacctttcctcttctgctggctcaggcaagagaaggcgaaggggt
aacctgcccaaagaatccgtccagattctccgagattggctgtatgaacaccgatacaac
gcctatccctcggagcaagagaaagcattgttgtcccaacaaacacacctatctacgcta
caggtctgtaattggttcatcaatgcccgccgcagacttctccccgacatgctgagaaag
gatggcaaagatccaaatcagttcacaatttcccgtcgtggggccaagatttctgaagca
agctctgtggagtcagcagtgggcatcaaaaacttcatgccagctctagaggagagccca
tttcattcctgcacagccggtctaaatccagcccttggggggccattgtcccctaaacca
tcatctccaggatcaattttggcacgtccatcagtgatctgccataccactgtgactgca
ttgaaagatgtgcctttctctctctgccaaccggttggtgtgggacagaacacagaaata
cagcaagtagcagccaacaactttatagacacctccctcatgtacccggatgacacatgt
aaatctggaccaagtacgaatacacagagtgggcttttcaacactccccctccaactcca
ccggacctcaaccaggattttagcggatttcagcttctagtggatgttgcactcaaacgg
gctgcagagatggagcttcaggcaaagcttacagcttaa
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