Sorex fumeus (smoky shrew): 130045386
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Entry
130045386 CDS
T10594
Symbol
DSC1
Name
(RefSeq) desmocollin-1
KO
K07600
desmocollin 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04382
Cornified envelope formation
sfum04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
130045386 (DSC1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130045386 (DSC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130045386 (DSC1)
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Major cadherins
130045386 (DSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_pro
RET_CLD1
Fibulin_C
Ig_CLSTN
UPF0114
Motif
Other DBs
NCBI-GeneID:
130045386
NCBI-ProteinID:
XP_055994206
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MAVACASPGSIFCKQFLFSLLVLILLGDACQKISLQVPSHLPSGTLVGKVNLKECLSSVS
LIESSDPDFSIQEDGSIFTTQDLSLSSERKSFSIFLSDSQTKESKIMEITLVKRKKKVME
KRHSRSAERMLRRSKRRWAPIPCSLMENSLGPFPQHVQQVQSDTAQNYTIFYSISGPGVD
KEPFNLFYIDKDSGDIFCTRSIDREQYEEFPIYAYATTEDGYAPEYPLLLLFKVEDDNDN
APYFETKLTVFSIPENCRSGTPVGKVTAVDLDEPNTLHTRLKYKILQQIPDNPTHFSVHP
DTGVIKTLTPLLDREKCDTYQLVMEVRDMGGQPFGLFNTGTITISLEDENDNSPYFTETS
YITEVEENRIDVEILRMKVHDMDLPNTPHSRAVYKILKGNENGNFKISTDPNTNEAVLCV
VKALNFEASKEVVLQIGVVNEAQFSKPANSQGPTMCTTTVTVKVKDADEGPECQPPVRVL
QSRDGLQVGQALQGYQAVDPETRSGQGLTYKKIVDEDNWFEIDENTGNLKTVKVLDRESK
FVKNDRYNVTIVAMDANGKSCTGTLVIFLEDFNDHPPQIVKEVTICQNDKDFAVLQPVDL
DGPDNGPPFQFILDNSASRLWTIEPRDGGKTAIIRQRQTLESNFYTVPMQIKDRHGISAR
HMLTVRVCDCTTPSDCKMRAQDRDAKPNVILGRWAILAMVLGSALLLCILFTCFCVTVKR
TAKKCIPEDVAQQNLIVSNTEGPGEEVTEANIRLPTQASNICDTSMSVGTLGGQGIKTQQ
SFEMLKGGYTLESNKGGGHQTLESVKGVGQGGMDVGRYTYTDWHSFTQPRLGEESIRGHT
LIKN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctgcgcttccccagggagcatcttctgtaagcagttccttttctctctc
ctggttttaatattactgggcgatgcttgtcagaaaatttctcttcaggttccttctcat
cttccatctggcacacttgtgggcaaagtgaatctgaaggagtgcctcagctctgtcagc
ctcatcgagtcgagtgatcctgacttcagtattcaggaagatggctcaatttttaccaca
caggacctcagtttatcttctgaaaggaagagtttctcaattttcctttcagacagtcag
acaaaggaatcgaaaataatggaaattacactggtaaaaagaaaaaagaaggttatggag
aagagacacagcagatctgcagaaagaatgctcaggcgcagcaagagaagatgggctcct
attccctgctcactgatggagaactcattagggccctttccacaacatgttcagcaggtt
caatctgatactgcacagaactataccatattttactccataagtggaccaggagtagac
aaagagcctttcaatttgttttatatagataaagatagtggagatatcttttgtacacga
agcatcgaccgtgagcaatatgaagagtttccgatatatgcctatgcaacaactgaagat
ggttatgcaccagagtacccactactgttattattcaaggttgaagatgacaatgataat
gccccatattttgaaacaaaattgactgttttcagtatacctgaaaattgcagatctgga
actccagtgggaaaagtgactgccgttgaccttgatgaacccaacactctacatactcgt
ctgaagtacaaaatcttgcagcaaatcccagataatccaacgcatttctccgtacatcca
gatacaggtgtcatcaagacacttacgcctttactggatagagaaaaatgtgatacgtat
cagttagtaatggaagtgcgagatatgggaggccaaccttttggtttatttaatacggga
acaattacaatttcactagaagatgaaaacgacaattcgccatattttacagaaacctct
tatattacagaagttgaagaaaatagaattgatgttgagattttacgaatgaaggttcat
gatatggatttgccaaacactcctcactcaagggctgtatacaagatcctgaaaggaaat
gaaaatggaaacttcaaaattagcacagacccaaatacaaatgaagctgtcttgtgtgtt
gtcaaggcattaaactttgaagccagtaaagaagttgttttgcaaattggtgtagttaat
gaagctcaattctctaaaccagcaaactctcaaggtcctacaatgtgcactactactgtc
actgttaaagttaaagatgctgatgagggtcctgagtgccaacctccagtcagagttctt
cagagtagagatggtctccaagttggtcaagctcttcagggataccaagctgtagatcca
gaaactcgcagtggccaaggcttaacgtataagaagatagttgatgaagataattggttt
gaaattgatgaaaacaccggtaatctgaaaactgtaaaagtgcttgacagagaatcaaaa
tttgtaaaaaatgatagatacaatgttactattgtcgcaatggatgcaaatggaaaatct
tgcactggaacattagtaatttttttggaagactttaatgatcaccctccacagattgta
aaagaagtgacgatttgtcagaatgataaggactttgctgttcttcaacctgtggatcta
gatgggcctgacaatggtccacctttccaattcattctggacaattctgcaagcaggctt
tggacgatagaaccaagggatggaggcaaaactgccattattcgtcaacgacaaactctc
gaaagtaatttttatactgtacctatgcaaataaaagatagacatggtatttctgcaaga
cacatgttaacagttagagtatgtgattgcacaactccaagtgactgtaaaatgagagct
caagacagagatgccaagccaaatgttatccttggaagatgggctattcttgccatggtt
ttgggttctgctttgttgttatgtattttgtttacatgtttctgtgttactgttaaaaga
acagcaaagaaatgtattcctgaagatgtagcccagcaaaatttaattgtatcaaatact
gaaggacctggagaagaagtgacggaagcaaatattagactccccacacaggcatccaac
atttgtgacacaagcatgtctgttggcactcttggcggccagggaatcaagacgcagcag
agttttgagatgctgaaaggcggctacactttggaatccaacaaaggaggtggacaccag
accctggagtctgtcaagggagtaggacagggaggaatggatgttggcagatacacatat
accgactggcacagcttcacgcagcctcggcttggcgaagaatccattagaggacacact
ctgattaaaaattaa
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