Sorex fumeus (smoky shrew): 130045523
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Entry
130045523 CDS
T10594
Symbol
DSG4
Name
(RefSeq) LOW QUALITY PROTEIN: desmoglein-4
KO
K07599
desmoglein 4
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130045523 (DSG4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130045523 (DSG4)
Cell adhesion molecules [BR:
sfum04515
]
Cadherins
Major cadherins
130045523 (DSG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
130045523
NCBI-ProteinID:
XP_055994422
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MHKYVLMLFFLXQVVLEVNSEFIVEVKELDITNGTTKWQTVRRQKREWIKFAAACREGED
NSKRNPIARIRSDCEVNQKITYRISGVGIDRPPYGVFTINPRTGEINITSVVDREITPLF
LIYCRALNSRGEDLERPLELRVKVMDINDNPPVFTQNVYTATIEENSEANTLVVKLSATD
ADEDNHLNSKIAYKIISQEPAGAPMFILNRYTGEVRTMSSFLDREQHSMYNLLVRGSDRD
GATDGLSSECDCRIKVLDVNDNFPTLEKTSYSASIEENCLSSELLRLQAIDLDEEGTDNW
LANYFILSGNDGNWFDIQTDPHTNEGILKVVKTLDYEQMPNIHLGIGVKNQAEFHPSVAS
QFRMQSTPVIIQVINVREGPTFQPDSMTFSVREGLRGDSLLNYVLGTYTAVDLDTGHPAT
NVRYIIGHDAGSWLKVDSRTGEIRFSREFDQKSKYITNGIYTAEILAIEDRSGKTATGTI
CIEVPDANDYCPVIFSESDNICIGSPAVVIYVSDHSYGSPFTFCVADQPPGTADLWDIRS
INATSAILVPEQLLISGIYQIPIVVKDSFNRACELSQVIQLQACDCDNNHVCLYSSTTGI
YGSATNDIYITEDQVGGSNVGLSRTGIGMIALGALLLLLSPLLLLICCCKRRKPVGLGTR
FAPVPEGGEGVIQSWGIEGAQPEDRDVSNICVPMTASNTQDRIDSSEIYTNTYAAGGTVE
GGVSGVELNTGGIGAAAGLAAGGASGAIRRRSSTQGTQWEYADNGLNMAFLDNYFSEKAY
AYADEDEGRPANDCLLIYDHEGVGSPVGSIGCCSWIVDDLDESCMETLDPKFRTLAEICL
DTEIEPFPSQQACIPISTDLPLLGPNYFVNESSGMTLSEAEFQAEMAMAEPLIHGDIVVT
ETYTTADQCMQPTTIVFDPQLASNVVVTETVMAPVYDVQGNICIPAELADTHNVIVTERV
LSSPCMPDMNNSSMTDGCILVAPEIQVTQMMSPDIHISQTIDSTSPMTSRHRVTRYSNIH
YSPQ
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgcataaatatgtgttaatgcttttctttttataacaggtggtgctggaagtaaacagt
gaatttattgttgaggttaaggaattagacattacaaatggcactacaaaatggcaaact
gtcagaagacaaaagcgggagtggatcaagttcgctgcagcctgtagagaaggagaggac
aactccaagaggaatccaattgccagaatccggtcagactgtgaagtgaaccagaagatt
acataccgcatctcaggagtaggaattgatcgaccaccttatggagtgttcaccattaat
cctcggacaggcgagattaatattacttcagttgtagacagagaaataacaccgcttttc
ttaatatattgtcgagctctgaattcacggggtgaagatttagaaaggccacttgaactc
agagtcaaagttatggacataaatgacaacccgccagtctttacacaaaatgtgtataca
gctactattgaagaaaacagtgaagcaaacacactggtagtaaagttaagtgccacggat
gcagatgaagacaatcatttgaattctaaaattgcctacaagatcatctctcaggaacca
gcaggtgcaccaatgttcattttgaataggtacactggagaagttcgcacgatgtccagt
ttccttgacagagagcaacacagtatgtataacctcctcgtgagaggttcagatcgggat
ggagctacggatggactgtcttctgaatgtgactgtagaatcaaggttttagatgtcaat
gataatttccctaccttagagaaaacttcatattcagccagtattgaagagaattgttta
agttcagaactgttacgattacaagcaattgaccttgatgaagaaggaaccgataattgg
ttggcaaattatttcattctctctggaaatgatggaaattggtttgatatacaaacagac
ccacataccaatgaaggcattctgaaagttgtcaagactctcgattatgaacaaatgcct
aatattcatctcggtattggagttaaaaaccaagctgaatttcatccctcggttgcctct
caatttcgaatgcagtcaacccctgtgataattcaggttattaatgtgagagaaggaccc
acatttcaaccagattctatgactttcagtgtgcgagagggactaagaggagattcctta
ttgaattatgtgcttggcacatacacagctgtagatttggacacaggacaccctgcaaca
aatgtcaggtatatcatagggcatgatgcaggcagctggctaaaagttgattcaaggaca
ggtgagataagattttctagggaatttgatcagaagtcaaaatatattactaatggaata
tacacagcagagattctagctatagaagatcgttctgggaaaacagctacgggaactata
tgcatcgaagttcctgatgctaacgattactgtccagtaattttttctgaaagtgacaat
atctgcattggctctccagcagtagtgatctatgtcagtgatcattcttatgggtctccc
tttaccttctgtgttgctgatcagccaccagggacagctgatttatgggatattagatca
ataaatgctacctcagcaattctggtgcccgagcagctcttaatttcaggaatttaccaa
attcccatcgtagttaaggacagttttaaccgagcttgtgaattgtcacaggtcatacag
ttacaagcctgtgactgtgacaataaccatgtgtgcttgtactctagcaccacaggcatc
tatggctctgctaccaatgatatatatatcactgaagaccaagttgggggttcaaatgtt
ggtctcagccgaacagggattggcatgatcgccctgggtgccttactgctgcttttgtca
ccgctcttgctactgatttgttgttgcaaacgaaggaagccagtaggcctggggacaagg
tttgctcctgtgccggaaggaggagaaggagtgattcagtcttggggaatcgaaggagcc
caaccggaagacagggatgtgtcaaatatatgtgtgccaatgactgcctctaatacccag
gatcggatagattcttccgaaatctacaccaatacctatgcagccggaggaactgttgaa
gggggtgtatcaggagtagaactcaacacaggaggcattggggcagctgctggcttggca
gctgggggagcatcaggagcgatacggaggaggagttcaacacaagggacccagtgggag
tacgcagacaatggcctcaacatggctttcctggacaactatttctcagagaaagcatat
gcttatgcagatgaagatgaaggtcgtccagcaaatgactgcttgctcatctatgatcac
gagggagtagggtctcctgtgggctccattggttgttgcagttggattgtggatgattta
gatgaaagctgcatggaaactttagatccgaaatttaggactctcgctgagatctgctta
gacacagaaattgaaccatttccttcacagcaggcctgtatacctatcagtactgacctc
cctttgcttggacctaattactttgttaatgaatcttcaggaatgactctctcagaggct
gaatttcaggcagaaatggcaatggctgaaccccttattcatggggatattgtcgtgact
gaaacttatactactgctgatcaatgtatgcaacctacaacaattgtatttgaccctcaa
cttgcatccaatgttgtagtaaccgagacagtcatggcacctgtctatgatgttcaaggg
aatatttgtatacctgctgagttagctgacacacacaatgtaatcgttactgagagagtg
ctctccagtccctgtatgcctgacatgaacaacagtagcatgactgatggctgtattttg
gtagcgccagaaattcaagtgacacagatgatgagtccagacattcacataagtcaaacc
attgattctacatccccaatgacatctcgacacagagttacacggtatagtaacatacat
tattctccacaataa
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