Sorex fumeus (smoky shrew): 130045819 Help Entry 130045819         CDS       T10594                                  Symbol TNC Name (RefSeq) tenascin   KO K06252   tenascin Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04151   PI3K-Akt signaling pathway sfum04510   Focal adhesion sfum04512   ECM-receptor interaction sfum04518   Integrin signaling sfum05165   Human papillomavirus infection sfum05206   MicroRNAs in cancer Brite KEGG Orthology (KO) [BR:sfum00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     130045819 (TNC)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     130045819 (TNC)    04518 Integrin signaling     130045819 (TNC)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     130045819 (TNC)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     130045819 (TNC)   09172 Infectious disease: viral    05165 Human papillomavirus infection     130045819 (TNC)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sfum00536]     130045819 (TNC) Glycosaminoglycan binding proteins [BR:sfum00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    130045819 (TNC) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 EGF_TEN Fibrinogen_C EGF_Teneurin EGF_2 EGF_Tenascin Fn3_Dep-1_3rd FN3_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_2nd Fn3_VIN3 DUF7949 Ig_ENGASE1_C EGF NDNF fn3_2 Arylsulfotran_N Motif Other DBs NCBI-GeneID:  130045819 NCBI-ProteinID:  XP_055994677 LinkDB All DBs Position Unknown AA seq 2384 aa AA seqDB search MGAVTWLLAGIFLALSTIPTEGGVLKRVIRHKRQSGANVTLPEENQPLVFNHIYNIKLPM GTQCSVDLESPSGDKDVAPPPEPSESFQEHTVDGQNQIVFTHRINIPRRACGCASAPDIK ELLNRLEELESVVSSLREQCNTGAGCCLQSAEGRLDTRPFCNGRGNFSTEGCGCICEPGW KGPNCSESECPGNCNLRGQCVDGQCVCDEGFTGEDCSQLACPGDCNDQGKCVNGECVCFE GYSGPDCSEEVCPVPCSQEHGRCVDGQCVCQDGFAGHDCTEPLCLNNCQNRGRCVENECV CDEGFTGDDCSELICPNDCFDRGRCVNGTCYCEEGFEGEDCGQLTCPHACHGQGRCDEGQ CVCHEGFAGPDCSERRCPADCHHRGRCVHGRCECDAGFTGHDCGELQCPNGCSGHGRCVN GQCVCDEGYTREDCGQRRCLNDCHGRGRCVEGVCVCQPGFQGADCSDIRCPHDCHGQGRC VNGMCVCEDDFTGEDCRERRCPRDCSRRGRCVDGRCECEDGFTGPDCSELACPANCHGQG RCVNGQCVCYEGFTGKDCQERRCPADCHGQGRCVDGQCVCHEGFEGPDCAQRSCPNGCSN LGQCVAGRCICNEGHTGEDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLITYTPTH ADGLEMEFRVPGDQTSTTIRELEPGVEYFIRVFAILENKKSIPVSARVATYLPAPEGLKF KSIKETSVEVEWDPLDIAFETWEISFRNMNKEDEGEITKSLRRPETTYRQTGLAPGQEYE ITLHIVKNNTRGPGVKRVTTTRLDAPSQIEVKDVTDNTALITWVKPLAEIDGIELVYGIK DVPGDRTTIDLTHDENQFSIGKLKPDTEYEVSLISRRADMSSTPANETFTTGLDAPRNLR RTSQTDNSITLEWRNVKANVDSYRIKFAPIAGGDHAEIEIPKSQEATTRTTLTGLRPGTE YGIGVSAVKGDKESDPTTINAATDLDAPKDLRVSETSETSLNLLWKAPLAKFDHYRLNYS LPGGQPMEVQLPRDVTSYVLKDLEPGKEYSILLKAEKGRHRSKPARVKASTDHIPELENL TVTEVGWDGLKLHWTTADRAYEHFVIQVQETSGVEAAQNITVPGNLQNVDIPGLKAATPY RVTLYGVTRGSRTPVLSAEASTGKTPSLGEAIVSEVGWDALTLNWTAPEGAFEHFLIEVQ ERDTVEAAQNLTVPGGLRSMDLPGLKAATHYRVSICGVAQDFSTTPVSVEVLTEEVPDLE NLTVTEVSWDILMLDWTSPDGIYEQFVIEVQETEQDEDVHRLLVPGSLHSVEIPGLRAGT RYTITLHGEVRGRSSRPLAVEAITEELPQLGDLAVTEVGWDGLKLHWTAADQAYEHFVIQ VQEANHVEETRNFTVPGSLQDVDIPGLKAATPYRVTLYGVIRDSRTPALSAEAFTAGEPE IRNIEVSDITPDSFNLSWTATDGAFETFTIEIIDSNRFLKTLEYNISGAERTAHISGLRP NNDFIVYLSGLTPNIGTKTITTTATTVAEPLLSHFTVSNVTWDSVTLTWKAQDSTFDSFL IEVRNSDHPQETVVRSVPAVFHSLVISNLKASSNYTAHLHGLIGGQRAQTLMVQATTEPE PQLATLILSNITPDSFNVSWTTQDGPFAKIVINVSDAHSIHESQQFTVPGDAQHAHITGL VEGTGYDVSVAGTTQAGKPTRPLTAFVMTEALPLLENLTIFDINPYGFTVSWMASENAFD SFLVVVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVILSGFIQGHQTKPLRAEVIT EAEPEVDNLLVSDATPDGFRLSWTADEGVFDSFVLKIRDTKKQSEPLEITLLAPDRTRDI TGLREATEYEIELYGISNGRRSQPVSALATTAMGSPKEIIFSDITENSATVSWMAPMSQV ESFRVTYVPVGGGTPSVVTVDGTETRSRLVKLLPGEEYLVSVIAMKGFEESDPVSGTFTT ALDGPSGLVTANITESEALAMWQPAIAPVDTYIISYVAERVPEITRTVSGNTVEFELTDL EPATEYTLRIFAEKGPQKSASLTTKFTTELDPPKDLTATEVLPETALLTWKPPRAAVTGY LLVYESVDGTVKEVIVGPETTSYNLADLSPSTHYTAKIQALNGPLRSKLVQIIFTTIGLL YPFPRDCSQAMLNGDTTSGLYTIYLNGDKDQALEVFCDMASDGGGWIVFLRRKNGLEDFY RNWKAYEAGFGDRREEFWLGLDNLHKITSQGQYELRVDLRDHGDSAYAVYDKFSVGDAKS FYKLKVEGYSGTAGDSMAYHNGRSFSTYNKDTDSAITNCALSYKGAFWYKNCHRVNLMGR YGDNSHSQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA NT seq 7155 nt NT seq  +upstreamnt  +downstreamnt atgggggctgtgacttggttgttggctggaatcttcctagctttgtctaccattccaact gaaggaggagtccttaagagagtcatccggcacaagcgacagagtggggcaaatgttacc ttaccagaggaaaaccagccactagtatttaatcatatatacaacatcaagctgcccatg ggtacccaatgctcagtggatctggaatcccccagtggtgataaagatgtggccccacca ccagagcctagtgaaagctttcaggaacacaccgtggatgggcagaaccagatagtgttc actcatcgcatcaacatcccccgccgggcctgtggttgtgcctctgctcctgacatcaag gagcttctgaatcgactggaagagctggagagtgtggtgtcttccctacgagagcagtgc aacacaggggcaggatgctgtctccagtctgctgaaggccgcctggacacccggcccttc tgcaatggcagagggaacttcagcaccgaaggctgtggctgtatctgcgaaccgggctgg aaaggtcccaactgctccgagtcggaatgtcctggcaactgcaacctgcggggccagtgc gtggacggacagtgtgtctgcgacgaaggcttcacgggggaagactgcagccagctggcc tgtccgggtgactgcaatgaccagggcaagtgcgtgaacggggagtgtgtgtgcttcgag ggctactcggggcccgactgcagcgaggaggtgtgcccggtgccgtgcagccaagagcac ggccgctgcgtggacggccagtgcgtgtgccaggacggcttcgcaggccacgactgcacg gaacccctgtgcctgaacaactgccagaaccgcgggcggtgcgtggagaacgagtgcgtg tgcgacgagggcttcacgggcgacgactgcagcgagctcatctgccccaacgactgcttc gaccgcggccgctgcgtcaacggcacgtgctactgcgaggagggctttgaaggcgaggac tgcggccagctcacctgcccccacgcctgccacggccagggccgctgcgacgagggccag tgcgtgtgccacgagggcttcgcggggcccgactgcagcgagcgccgctgccccgccgat tgccaccaccgtggccgctgcgtgcacgggcgctgtgagtgcgacgccggcttcactggg cacgactgcggcgagctccagtgtcccaacggctgcagtggccacggccgctgcgtgaat gggcagtgcgtgtgcgacgagggctacacccgggaggactgcgggcagcgccgctgcctc aacgactgccacggccggggccgctgcgtggagggcgtgtgcgtgtgccagcctggcttc cagggtgccgactgcagcgacatccgctgtccccacgactgccacgggcagggccgctgc gtgaacggcatgtgcgtgtgcgaggacgacttcaccggcgaggactgccgagagcgccgc tgtccccgagactgcagccgccggggccgctgcgtggacggtcgctgtgagtgcgaggac ggcttcaccggccctgactgctccgagctcgcctgtcccgccaattgccacggccagggc cgctgcgtcaacgggcagtgtgtgtgctacgaaggtttcacgggcaaagactgccaggag cggaggtgccccgccgactgccacggccagggccggtgcgtggacggacagtgcgtgtgc catgagggtttcgagggcccggactgtgcgcagcgctcctgtcccaacgggtgcagtaac ttgggccagtgcgtggccggacgctgcatctgtaacgagggccacaccggagaagactgc tctgaggtctctcctcccaaagaccttatagtgacagaagtgacagaagagactgtcaat ctggcttgggacaatgagatgcgggtcacagagtatctcatcacgtatacacctactcat gcggatggcctggaaatggagttccgcgtacctggagaccagacatccaccaccatccgg gagctggaacctggagtggaatacttcatccgcgtgtttgccatcctggagaacaagaag agcattcccgtcagtgcccgggtggccacctacttgcctgcacctgaaggcctaaaattc aagtctatcaaagagacatctgtggaagtggaatgggaccctctagatattgcctttgaa acatgggaaatcagtttccgcaatatgaataaggaagatgagggagagatcacaaaaagc ctgaggagaccagagactacttacaggcaaactggcctggcgcctggacaagagtatgag ataactctgcacatcgtgaaaaataacacccgaggcccaggagtgaagagggtgacaacc acgcgtttggatgcccccagtcagattgaggtgaaagatgtcacagacaatactgccctg atcacgtgggtcaagcccctggcagaaatcgatggcattgagctcgtctatgggatcaaa gatgtgcctggtgaccgcaccaccatcgatctcacgcatgatgagaaccagttctccatt gggaagctgaagccagacacagagtatgaggtgtctcttatctcccgcagagccgacatg tccagcaccccagccaacgagaccttcacaacaggcctggatgcccccagaaacctgcgg cgtacctctcagacagacaacagcattaccttggaatggaggaatgtcaaagcaaatgtg gacagttacagaatcaagtttgcacctatcgctgggggtgaccacgctgagattgaaatc cccaagagccaagaagccacaaccagaactacactcactggtctgaggccaggaactgag tatggaattggtgtatcagctgtgaagggggacaaggagagcgatcctaccactataaat gcggccacagatctggatgcacccaaggaccttcgggtttctgaaacttcagagaccagc ctgaacctgctctggaaagcgccactggccaagtttgaccattaccgtctcaactatagc cttccaggaggacagcccatggaagtgcagctccccagagacgttacctcctacgtcctg aaagatctggagcccgggaaggaatatagcatcctcctaaaggcagagaaaggcagacac agaagcaagccagcacgtgtgaaggcctccacagaccacatccctgaattggaaaacctc accgtgaccgaggttggctgggatggcctaaaactccactggaccacagctgatcgagcc tatgagcactttgtcattcaagtgcaggaaaccagtggggtggaggcagctcagaacatc acagtccctgggaacctccagaatgtggacatccctggcctcaaggctgccaccccttat agggtgactctctatggggtgacccggggctctaggacaccagtactctctgctgaggcc tccacagggaaaactcccagtttgggagaagccatcgtgtccgaggtgggctgggatgcc ctcacactcaactggacagctcccgaaggggcatttgagcactttctcattgaggtgcag gagagagacacagtagaggcagctcagaacctcacagtcccaggaggactgaggtccatg gacttgcctgggctcaaagcagcaacacattatagagtctccatctgtggggtcgctcag gacttcagcacaacccctgtctcagttgaagtcttgacagaggaggttccagatctagaa aaccttacagtaactgaggttagctgggatatcctcatgctggactggacttccccagat gggatctatgaacagtttgtcattgaggttcaggaaacagagcaagatgaagatgtccac aggctcctagtgcctggcagcctacattcagtggagatcccaggactgcgggctggcacc cgttacacaatcaccctgcatggcgaggtcaggggtcgcagctctcgaccccttgctgtg gaggctatcacagaggagctcccccagctgggagacttagctgtgacagaggttggctgg gatggcctcaaactccactggaccgcagctgaccaagcctatgagcactttgtcattcag gtgcaggaggccaaccatgttgaggagactcggaacttcacagtacctggtagcctccag gatgtggacatcccaggtctcaaggctgccaccccttatagggttactctctacggggtg atccgggactctaggacaccagcactctctgctgaggccttcacagctggagaaccagaa atcagaaacatagaggtttctgacataactcctgacagcttcaatctctcctggacagcg acagatggcgcctttgagacttttaccattgaaattattgattccaataggttcctgaag acactggaatataatatctctggtgctgaacggactgcccacatctctgggctccgccct aataatgattttattgtctacctctctggactcactcccaacatcgggaccaaaaccatc accaccacagccaccacagtagctgagcctctccttagtcacttcacagtctcaaatgtg acctgggacagtgtgactctcacgtggaaagctcaggactccacctttgatagctttctt atagaagttaggaactctgaccacccccaggagacggtggtgcgttctgtgcctgcagta ttccacagccttgtcatcagcaacctcaaagcttcttctaattacactgcccacctccat gggctgattggtgggcagcgtgctcagaccttgatggtccaagcaaccacagagccagag ccacagttggccacactaatccttagcaatattactcctgacagcttcaacgtgtcatgg accacccaagatgggccttttgcaaagattgttatcaatgttagtgatgctcactcgata catgagtcccagcaattcacggtcccaggagatgcacagcacgctcacatcaccggcttg gtggagggcactggctatgacgttagtgttgcagggaccacccaggctgggaaacctacc agacccctcactgcctttgtcatgacagaggctctgccccttctggaaaacctaaccatt ttcgacattaatccttacgggttcacagtgtcctggatggcatcggagaatgcctttgac agtttcctagtggtggtggtggattctgggaagctgctggatccccaggaattcaccctt tcaggaacccagaggaaattggagctaagaggccttataactggcattggctatgaggtt atactctctggcttcatccaagggcaccaaaccaagcccttgagggctgaggttattaca gaagccgagccagaagttgacaaccttttggtttcagatgccaccccagacggtttccgt ctgtcctggacagctgacgagggggtcttcgacagttttgttctcaaaatcagagatacc aaaaagcagtctgagccactggaaataactctccttgcccctgaccgtaccagggacata acaggtctcagagaggccactgaatatgaaattgagctctatggaataagcaatggaagg cgatcccaaccagtcagtgctctagcaacaacagcaatgggctccccaaaagaaatcatt ttctcagacatcactgaaaactcagccaccgtcagctggatggcacctatgtcccaggtg gagagcttccgggttacctatgtgcctgttggaggaggcaccccctcagtggtaactgtg gatggaaccgagacacgaagcaggctggtgaaactcttgcctggagaagagtacctggtc agcgtcattgccatgaagggctttgaggaaagtgaccctgtctcagggaccttcaccaca gctctggatggcccatctggcctggtgacagccaacatcaccgaatcggaagctttggcc atgtggcagccagccatcgcccccgtggacacatacattatctcctacgtagcagaaaga gttccagaaatcacacgtacggtgtccgggaacacggtggagtttgaactgacagatctg gagcctgccacagaatacaccctgaggatattcgcggaaaaggggcctcagaagagcgca agcctcaccaccaagttcacaacagaacttgatcctccaaaagacttaactgctaccgag gtcctgccagaaaccgccctcctcacctggaaacccccgagagcagctgtcactggttac ctgttggtatatgaatccgtggatggtacagtgaaggaagtaattgtgggtccagagacc acctcctacaacctggcagatctgagtccatccacccactacacggccaagatccaggcc ctgaatgggcccctgaggagcaagttggtccagatcatcttcaccacaattggacttctg tacccattccccagggactgctcccaagccatgctgaatggggacacaacctctggcctc tacaccatttatctcaatggggataaggaccaggcgctggaggtcttctgtgacatggct tctgacggaggtggatggatcgtgttcctgagacgcaaaaatggacttgaagatttctat cgaaactggaaagcctatgaagctgggtttggggaccgcagagaagagttctggcttgga ctggacaacctgcacaagatcacatcccaagggcagtatgagctccgggtagacctgagg gaccatggagactcagcctatgctgtatacgacaagttcagcgtgggagatgccaagagt ttctacaagttgaaggtggaggggtacagcggcacagcaggggactccatggcctatcac aatggcagatccttctccacctacaacaaggacacagactctgccatcaccaactgcgcg ctgtcttacaagggggctttctggtacaagaactgccaccgtgtcaatctgatggggaga tacggggacaacagccacagtcagggcgtgaactggttccattggaagggccatgaatac tcaatccagtttgctgagatgaagctgagacctagcaacttccgaaatcttgaaggcagg cgcaaacgggcataa

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