Sorex fumeus (smoky shrew): 130045884
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Entry
130045884 CDS
T10594
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05014
Amyotrophic lateral sclerosis
sfum05017
Spinocerebellar ataxia
sfum05022
Pathways of neurodegeneration - multiple diseases
Brite
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130045884 (ATXN2L)
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Other DBs
NCBI-GeneID:
130045884
NCBI-ProteinID:
XP_055994715
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Position
Unknown
AA seq
1106 aa
AA seq
DB search
MLKPQPPQQTSQPQPPLPAPQAVARRPPGGSSPPNGGLPGPLAPAAAPPGPPAAAPPCLG
PAAAAAAAGSGLRRGPDALLAPPPPPPPHQDRPGAAAIGSARGQSTGKGPPQSPVFEGVY
NNSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRRED
IVDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNS
DDYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQ
LAREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLAAREGKYIPLPQRVRE
GPRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSESRGINGGPSRMSPKAQRPLRG
AKTLSSPGSRPSGEATVPPPPAALPFLPVGRIYPPRSPKSAAPAPISASCPEPPIGSAVP
TSSASIPVTTSIVDPGVGAISPASPKISLAPTDVKELPAKEPGRTLESQELPRIAGKVPG
LQNEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEELKGKEKEVDGLLTAEPI
GSPVSSKTDSVPDKEDKPPLPSAGGPEGSEQPPAPCPNQTGSPPVGLIKGDDKDDGPVAE
QVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYIS
YIPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAA
AAGPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSSPRMLTSGSHPQ
AIVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPS
PVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQ
QLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVP
ALSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPP
SSLSCDPAAPLPTASPALSDPDCLLT
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacagcagacctcccagccccagccgccgctccccgcgccg
caggccgtggcccgccggccgcccggcggctccagcccgcccaacggcggcctcccgggg
cccctggcgcccgccgcggcgccccccgggccgcccgcggccgcgccgccctgcctgggc
cctgccgccgccgccgccgccgccgggagcgggctccgccgcggccccgacgcgctcctg
gcgccgccgccgccgccgccgccgcaccaggaccggccgggggccgcggccatcggcagc
gccaggggacaaagcactggaaagggacccccccagtcaccggtgtttgagggtgtctac
aacaattccaggatgctgcattttcttacagctgtggtgggctctacttgtgacgtgaag
gtgaaaaatggtaccacctatgaaggtatcttcaagactcttagctctaagtttgaactc
gcagtagatgctgtgcaccggaaagcatctgagccagcaggtggccctcgtcgggaagac
attgtagacaccatggtgtttaagccaagcgacgtcatgcttgttcactttcgaaacgtt
gacttcaattatgctactaaagacaagttcactgattcagccattgccatgaactccaaa
gtgaatggagagcataaagagaaggtgcttcagcgctgggaggggggcgacagcaacagt
gatgactacgacctggagtctgacatgtccaatggatgggaccccaatgaaatgttcaag
ttcaatgaggagaactacggtgtaaagaccacttatgacagcagtctctcttcttacacg
gtgcccttagagaaagacaactcagaagagtttcgtcagcgggagctacgtgcagcccag
ctggctcgagagattgagtccagcccccagtatcgcttgcggattgccatggagaacgac
gatgggcgcactgaagaggagaagcacagtgcggtccagcgccagggctccgggcgagag
agccccagcctggcggccagggagggaaagtacatccctctcccccagcgagttcgggaa
ggtcccaggggaggagttcgatgcagcagttctcggggtggcagacctggccttagctcc
ttgccacctcgtggacctcaccatctcgacaacagcagtcccggcccaggttctgaatcg
cggggaatcaatggaggcccttcccgcatgtctccgaaggcacagcggcctctgcgaggt
gccaagacactgtcttccccgggcagcaggccttctggggaagcgactgtcccaccgcct
cctgcagctctcccttttcttccagtgggccggatatacccgcctcgttcacccaagtct
gctgccccagccccaatctcggcttcgtgtcctgagccacctattggttcagcagtacca
acctcgtcggcttccatccctgtgacaacatccatcgtggatcctggagtcggtgccatt
tccccagcttctccaaagatctcgctggcccccacagatgtgaaagaactaccagccaag
gaacctggtagaaccctggagtcccaggaattgccacggatagctggcaaagtccctgga
ctgcagaatgaacaaaaacgctttcagttggaggaactgagaaaatttggggctcagttt
aagcttcaacccagtagttcccctgagaccagtttggatcctttcccccctcggatccta
aaggaagagctcaaagggaaggagaaggaggtggatggtctgttgactgcagaacctata
gggtccccagtctcctccaagacagactccgttccggataaggaggacaagccacctctg
ccatcagctggaggccccgaggggtcagagcaacccccagcgccttgtccaaaccaaact
ggcagcccccccgtgggccttatcaagggagacgacaaggatgacggccctgtcgctgaa
caagtgaagaaatcaacattgaaccctaatgccaaggagtttaaccccacaaagcctctg
ctttctgtgaataaatccaccagtaccccaacttctccaggaccccggactcattcaact
ccctccatcccggtgctgacagcaggccagagtggactgtatagtccccagtacatttcc
tacatacctcagatccacatgggaccagctgttcaggcaccacagatgtatccatatcct
gtatccaactcagtgcctggacagcagggcaagtaccggggagcgaaaggctccctgccc
cctcagcgctcggaccaacaccagccagcctcggcacctcccatgatgcaggcggccgcc
gctgccggcccacctctggtggctgccactccttactcctcttacatcccctacaaccca
cagcagttcccaggccagccagccatgatgcagcccatggctcactacccctcacagccg
gtgtttgcccccatgcttcaaagcagcccccgcatgctgacgtctgggagccacccccag
gccattgtgtcatcctccactcctcagtacccctctgcagagcagcccaccccccaggcc
ctctatgccactgttcaccagtcctatccgcaccatgccacgcagctccatgcccaccag
ccgcaaccggccaccacgcctactgggagccagccccagtcccagcatgcggcccccagt
cccgtccagcaccaggcggggcaggccccacacctgggcagtggacagccacagcagaat
ctgtaccacccaggggccctgacaggcacgccgccttctctgccaccgggaccttctgcc
cagtcccctcagagcagctttccccaaccagccgctgtgtatgccatccatgcccatcag
cagctgccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactgga
atcacagcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctg
cacccaccccagagccatgggggccccccccaaggcgcggtgccccagagcggggtgcct
gcactgtcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcag
cccggccaggcgcctggatttccaggaggagccgatgacaggattctatgtagggtgggc
agaagccacagtcgccgccgccaggggcttgctcctggctctgtcctttgcttccctccg
tcctcgctcagttgtgatccagcagcccccctccccactgcctccccagctctcagtgac
cccgactgtctcctgacttag
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