Sorex fumeus (smoky shrew): 130046009
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Entry
130046009 CDS
T10594
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130046009 (RBBP6)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
U-box type E3
130046009 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130046009
NCBI-ProteinID:
XP_055994903
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKSLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAGRLLFHKLGTMGHKQ
IDTYFWNRGDVYGATATQITHLREAYAIGKKEKPPFLPEEPSSSSSEDDPIPDELLCLIC
KDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNNF
KNETGYTKRLRKQLPPPPPPIPPPRLIQRNLQPLMRSPISRQQDPLMIPVTSSSTHSAAS
MSSLTSNQSSLAPPVPGNPSSAPAPVPDITATVSISVHSEKSDGPFRDSDSKLLPAAALA
SEHSKGASSIAITALMEEKGYQVPVLGAPSLLGQSLLHGQLIPTTGPVRINTARPGGGRP
GWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSERSQRTQGPSLPATPVFVPVPPPP
LYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFPPAPANLSTPWVSSGVQTA
HSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSF
SRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRN
YRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQSFRAQSPNKRNVPQGETEREYFNRYREVP
PPYDMKAYYGRSVDLRDPFEKERYREWERKYREWYEKYYKGYAAGAQPRPSANRENFSPE
RFLPLSIRNSPFTRGRREDYSGGQSHRSRNIGGSYPEKLSARDSHNQKDNTKSKEKESES
APGDGKGNKHKKHRKRRKGEESESFLNPELLETSRKSREPTSGEENKTDSLFVPPSRDDA
TPVRDEPMDAESVTFKSVSEKDKREKDRPKAKGDKTKRKTDASAVSKKENAVKPAKGPQE
KLDGEREKSPRSEPPLKKAKEETPKTDSNKSSSSSQKDEKILGTPRKAHSKSTKEHQETK
QVKEEKVKKDYSKDVKSEKLTSSKEEKTKKPSEKSKSLDSKGEKRKRKTEEKSVDKDFES
SSSMKISKLEGTEIAKPSPKRKMEPDVEKMDRTPEKDKMSSSTAPAKKIKLNRETGKKIG
STENIPNTKELSEKLESTSSKVKQEKVKGKVRRKVTGSEGSSSTLVDYTSTSSTGGSPVR
KSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQPIS
NVGKPTSVIKNVSTKASNVVKYPEKENESLEKIQKLTKETSHEVTPHEVKSSKNPASSEK
GKTKDRDHSVLEKENPEKRKNNAPPEKDTNMDRVNEQGNFKNLSQSSKETRTSDKHDSLR
GSSNKDFTPSRDKKPDYDNRDYSSSSKRRDERNELTRRKDSPSRSKDSVSGQKTKPREER
DLPKKGTGDSKKSASPLKDKKPHDHNKATCVDTKHTSEETKSVDKNLIKDREKHSLEARN
NKEASGNKLLYVLNPPDPQIEKAEQVLTVSADKNAIKPKPQLSHSSRLSSDLTRETDEAA
FEPDYNESDSESNVSIKEEETPGKNPKEVKEKVVEKAKESVDPAAVSQTGVARSQSQSSP
SVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVE
LEKGQKHKHKKKKSKKNKDKEKEKEKDDQKVKSVTV
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgtgcattacaaattctcttccaaactcaactatgacaccgtcaccttcgac
gggctccacatctccctctgcgacctgaagaagcagatcatggggagggagaagctcaag
gcggccgactgcgacctgcagatcaccaacgcgcagacgaaagaagagtatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttactaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtctcaatctggccat
gaatacgaccctatcaattatatgaagaagtctctcggtcccccacctccatcttatacc
tgtttccgttgtggtaaacctggccattatattaagaattgcccaactaatggggataag
aactttgaatcaggccctaggattaaaaagagcactggaatacccagaagttttatgatg
gaagtgaaagaccctaacatgaaaggtgcaatgcttaccaacactggaaaatatgcaata
ccaactatagatgctgggagactcctctttcacaaattgggaacaatggggcataagcaa
attgatacttatttctggaatcgtggtgatgtctatggagcaactgcaacacaaataaca
cacctaagagaagcatatgcaatagggaagaaagaaaagccacctttcttaccagaagaa
ccttcttcttcttcttctgaagatgatcctatcccagatgaattactgtgtctcatctgc
aaagatattatgactgatgccgttgtcattccctgctgtggaaacagttattgtgatgaa
tgtataagaacagctctcctggaatcagatgagcatacatgtccaacctgtcatcagaat
gatgtctctcctgatgctttaattgccaataaattcttaagacaggctgttaataacttc
aaaaatgaaactggatatacaaaaaggctgcgaaaacagttaccaccacctccaccccca
atcccacctccaagactcattcagaggaatctacaacccctgatgaggtccccaatatca
agacagcaggatcctctgatgattccggtcacatcatcatcgactcactctgctgcttct
atgtcttcattgacgtctaatcagtcttccttggcccctcctgtgcctggaaatccatct
tctgccccagctcctgtgcctgatataactgcaacagtctccatatcggtccactctgaa
aaatcagacggacctttccgggattctgatagtaaattactgccagcggcagcccttgca
tcagagcactcaaaaggagcatcttcaattgcaattactgctcttatggaagagaagggt
taccaggtgcctgtacttggagccccatctttgttgggacagtcgttactccatggacag
ttgatccccacaactggtccagtaagaataaatactgctcgtccgggtggtggccggcca
ggctgggaacattccaacaagcttggctatctggtttctccgccacagcaaatcagaaga
ggagagaggagttgctacagaagcataaatcgtggacgacatcacagcgaaagatcacag
agaactcaaggtccatcactgccagcaactccagtttttgtacctgtcccaccacctcct
ttgtatccacctcctccccatacacttcctctccctccaggtgttcctccaccacagttt
tctcctcaatttcctcctggccagccaccgcctgctgggtatagtgtccctcctccaggg
tttcctccagctcctgccaacttatcaacaccttgggtgtcatcaggagtgcaaacagct
cattcaaataccatcccaacaacacaagcaccacctttgtccagggaagagttctataga
gagcaacggagactcaaagaagaggaaaagaaaaagtccaagctagatgagtttacaaat
gattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgctcattt
tccaggtctaaaagtccctatagtggttcgtcatactcaagaagttcatatacttactca
aaatcaagatctggctcaactcgttcacgctcctattctcgatcatttagccgctcacac
tctcgttcctattcacgatcaccaccctaccccagaagaggccgaggcaaaagtcggaat
taccgttcacgctccagatctcatggataccatcgatctaggtcaaggtcacccccctat
agaagataccattcacgatcaagatctcctcaatcatttagggcacagtctcccaataag
cgtaatgtgcctcagggtgaaacagaacgtgaatattttaatagatacagagaagttcca
ccaccttatgacatgaaagcttattatggaaggagtgttgacctgagagacccatttgaa
aaagagcgttaccgagaatgggagagaaaatacagagaatggtatgaaaaatattacaaa
ggttatgctgcaggagcacagcctagaccatcagcaaatagagagaacttttctccggaa
agatttttaccactaagtatcaggaattctccctttacgagaggtcgtcgagaagattat
tctggtgggcagagtcatagaagtcgaaatattggtggcagctatccagaaaaactctca
gcaagagacagtcataatcagaaggataatacaaagtcaaaagagaaggaaagtgaaagt
gctccaggagatggtaaaggaaataaacataagaaacacagaaaaagaagaaagggggaa
gaaagtgaaagctttctaaatccagagctactagaaacctctaggaagtcaagagaacct
acgagtggtgaggagaataaaacagactcactgtttgtgccccccagtagagatgatgcc
actcctgttagagatgaaccaatggatgcggagtctgtcacttttaaatcagtttctgaa
aaagacaagagagagaaagataggccaaaagcaaaaggtgacaagaccaaacgcaaaaca
gatgcatctgctgtatccaaaaaagaaaatgctgtaaaacctgcaaaaggacctcaagaa
aaactagatggtgagcgtgaaaaatctcctcggtctgaacctccattaaaaaaagccaaa
gaggagactccaaagactgatagtaataagtcatcctcctcatctcagaaagatgaaaag
attcttggtactcccagaaaagctcactctaagtcaacaaaagaacatcaagagacaaaa
caagtgaaagaggaaaaagtgaagaaggactactccaaagatgttaaatcggaaaagtta
actagtagtaaagaagagaagaccaaaaagcctagtgaaaaaagtaaatcactagatagc
aagggagaaaagagaaaaagaaaaactgaagaaaagagtgtagataaagattttgagtca
tcatcatcaatgaaaatctctaaacttgaaggaactgaaatagctaagccatcccccaag
cgcaaaatggaacctgatgttgaaaagatggataggactcctgaaaaagacaaaatgtca
tcatcaactgccccggccaaaaaaatcaaacttaacagagaaactggtaaaaaaattgga
agtactgaaaatatacctaatacaaaagaactctctgaaaaattggaatcgacatctagc
aaagttaaacaagaaaaagtcaaaggaaaggtcagacgaaaagtaactggaagtgaagga
tccagctctactctcgtggattataccagtacgagttcaactggaggcagtcctgtacgg
aaatctgaagaaaaaacagatacaaaacgaactgtcattaaaactatggaggaatataat
aatgacaatacagctcctgctgaagatgttattattatgattcaggttcctcaatccaaa
tgggataaagatgattttgaatctgaagaagaagatgttaaatccacgcagcctatctca
aatgtaggaaaacccaccagtgttataaaaaatgtcagcactaaagcatccaatgtagtc
aagtatcctgaaaaggaaaatgagtcattggagaaaattcagaaactcaccaaggaaacc
agccatgaggtcacaccacatgaggtcaaaagttccaaaaatcccgcatctagtgaaaaa
ggaaaaaccaaagatcgagatcattcagtgttggaaaaggaaaaccccgaaaagaggaag
aacaatgctccgccagagaaagatactaatatggaccgtgtgaatgaacagggaaatttc
aaaaacctgtctcagtcatccaaagagactagaacttcagataaacatgattcccttcga
gggtcctcaaataaagacttcactcccagtagagacaagaaaccagactatgacaacagg
gattattcaagtagttccaaacgtagagatgaaaggaatgaattaaccagaaggaaagac
tctccttcccgcagcaaagattctgtatctggacagaaaactaagccaagggaggagaga
gacttgcctaaaaaaggaactggggattctaaaaaaagtgctagtcccttgaaagacaaa
aaacctcatgatcataacaaagccacttgtgttgatactaaacacactagtgaagagaca
aaatctgtagataaaaatctgattaaggatcgggagaaacactcattggaagcaaggaac
aataaagaggccagtggcaataaattactttatgtacttaacccaccggacccacagatt
gaaaaggctgagcaagttcttactgtttcagccgacaagaatgcgattaagcctaaaccc
cagttaagtcactcctcaagactttcctcagacttaactagagaaactgatgaggctgcc
tttgaaccagactataacgaaagtgacagtgaaagcaatgtatccatcaaagaggaagaa
actcctgggaaaaatcccaaggaagtgaaagagaaagtggtggagaaagcaaaagagagt
gtcgaccccgcagcagtcagccagacaggcgttgccaggagccagagccagagcagtccc
agcgttagcccaagcagaagtcacagcccttcaggaagccagacccgaagtcacagcagc
agtgccagctccgcagagagccaggacagcaagaagaagaagaaaaagaaggagaagaaa
aagcacaagaaacataaaaaacataagaagcataagaagcacgcgggcactgaagtcgaa
ttggaaaaaggccaaaaacacaaacacaagaagaagaagtcaaagaagaacaaagataaa
gaaaaggagaaggagaaagatgaccaaaaagtgaaatctgtcactgtgtga
DBGET
integrated database retrieval system
