Shigella flexneri 8401 (serotype 5b): SFV_0059
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Entry
SFV_0059 CDS
T00377
Symbol
yabK
Name
(GenBank) putative transport system permease protein
KO
K02063
thiamine transport system permease protein
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SFV_0059 (yabK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfv02000
]
SFV_0059 (yabK)
Transporters [BR:
sfv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Thiamine transporter
SFV_0059 (yabK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Atthog
Motif
Other DBs
NCBI-ProteinID:
ABF02346
UniProt:
Q0T8D0
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All DBs
Position
complement(70421..72031)
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AA seq
536 aa
AA seq
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MATRRQPLIPGWLIPGVSAATLVVAIALAAFLALWWNAPQGNWVAVWQDSYLWHVVRFSF
WQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGW
LASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRG
WHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDP
ARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALL
LLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELR
ARQKMLAGQALEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYA
LKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLEQALAFACVLSIGDFGVV
ALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcgccgtcagccgttaattcccggctggttaattccaggtgtaagcgccgcc
acgctggtggtagcgattgcgctcgcggcgtttctcgccctgtggtggaacgcgccgcag
ggtaactgggtggcagtctggcaggacagctacctgtggcatgtggtgcgcttctccttc
tggcaggcgtttctctcggcgctactctctgtcgtacccgcgatattcctcgcccgcgcc
ctctatcgcaggcgctttccgggtcggctggcgctgttgcgtctgtgcgcaatgaccttg
atcctcccggtgctagttgctgttttcggcattcttagcgtctatggtcgtcagggctgg
ctggcatcgctctgccaatcgctcggtctggagtggaccttttcgccctacggcctgcaa
ggcattttgctggcgcacgtattttttaatctgccgatggcgagccgcttattactccag
gcactggaaaacattcccggcgaacaacgtcagcttgccgcccagcttgggatgcgcggc
tggcattttttccgcttcgtcgaatggccgtggctacggcgacaaatcccgccggttgcc
gcgcttatctttatgctctgtttcgccagcttcgccaccgtgctatcgctgggcggcggt
ccgcaggcaaccactatcgagctggctatttatcaggcgctgagttacgactacgatcct
gcccgcgcggcgatgctggcgctgctccagatggtgtgttgccttgggctggtgctgttg
agtcagcgactaagtaaggccattgcgcccggcaccacgctgctgcaaggctggcgcgat
ccggacgatcgtctgcatagccgcatttgcgacacggtgttaatagtgctggcgctgctg
ctgttgctgccaccgttgctggcggtgatcgtcgatggggtaaatcgccagttgccggaa
gtgctggcacaaccggtgctgtggcaggcgctgtggacctcgttgcgtattgcgctggcg
gcaggtgtattgtgcgtagtgctgaccatgatgctgctatggagcagtcgcgaactgcgg
gcgcggcagaaaatgctggcgggtcaggcgctggagatgagcggcatgttgatcctcgcc
atgccggggattgtgctggctaccggcttctttttactgctcaacaacactatcggcctg
ccacaatctgctgacggcattgtgattttcaccaatgcgttaatggcgatcccttatgcg
ctgaaagtactggaaaacccgatgcgcgatatcaccgcccgctacagtatgttgtgtcag
tcgctgggcattgaaggctggtcgcgcttaaaagtggtcgagctgcgcgccctgaaacgt
ccactggagcaggcgctggcttttgcctgcgtgctgtcgattggtgattttggcgtagtg
gcgttgttcggtaacgatgatttccgtaccctgccgttttatctctaccagcaaattggc
tcctatcgcagccaggacggcgcggtcaccgcgttaattctgctactactctgttttctg
ctgtttaccgtgattgaaaaactaccggggcgaaatgttaaaactgactga
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