Shigella flexneri 8401 (serotype 5b): SFV_0107
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Entry
SFV_0107 CDS
T00377
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00010
Glycolysis / Gluconeogenesis
sfv00020
Citrate cycle (TCA cycle)
sfv00260
Glycine, serine and threonine metabolism
sfv00280
Valine, leucine and isoleucine degradation
sfv00310
Lysine degradation
sfv00380
Tryptophan metabolism
sfv00620
Pyruvate metabolism
sfv00630
Glyoxylate and dicarboxylate metabolism
sfv00640
Propanoate metabolism
sfv00670
One carbon pool by folate
sfv00785
Lipoic acid metabolism
sfv01100
Metabolic pathways
sfv01110
Biosynthesis of secondary metabolites
sfv01120
Microbial metabolism in diverse environments
sfv01200
Carbon metabolism
sfv01210
2-Oxocarboxylic acid metabolism
sfv01240
Biosynthesis of cofactors
Module
sfv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sfv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfv_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sfv_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SFV_0107 (lpdA)
00020 Citrate cycle (TCA cycle)
SFV_0107 (lpdA)
00620 Pyruvate metabolism
SFV_0107 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SFV_0107 (lpdA)
00640 Propanoate metabolism
SFV_0107 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SFV_0107 (lpdA)
00280 Valine, leucine and isoleucine degradation
SFV_0107 (lpdA)
00310 Lysine degradation
SFV_0107 (lpdA)
00380 Tryptophan metabolism
SFV_0107 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SFV_0107 (lpdA)
00670 One carbon pool by folate
SFV_0107 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfv04147
]
SFV_0107 (lpdA)
Enzymes [BR:
sfv01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SFV_0107 (lpdA)
Exosome [BR:
sfv04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SFV_0107 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
AlaDh_PNT_C
Thi4
NAD_binding_8
FAD_binding_3
DAO
Lycopene_cycl
FMO-like
Motif
Other DBs
NCBI-ProteinID:
ABF02392
UniProt:
Q0T884
LinkDB
All DBs
Position
125831..127258
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AA seq
475 aa
AA seq
DB search
MMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHV
AKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKF
TGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLL
VMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVT
AVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDK
QLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGG
ELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtactgaaatcaaaactcaggtcgtggtacttggggcaggccccgcaggttac
tccgctgccttccgttgcgctgatttaggtctggaaaccgtaatcgtagaacgttacaac
acccttggcggtgtttgcctgaacgtcggctgtatcccttctaaagcactgctgcacgta
gcaaaagttatcgaagaagccaaagcgctggctgaacacggtatcgtcttcggcgaaccg
aaaaccgatattgacaagattcgtacctggaaagagaaagtgatcaatcagctgaccggt
ggtctggctggtatggcgaaaggccgcaaagtcaaagtggtcaacggtctgggtaaattt
accggggctaacaccctggaagttgaaggtgagaacggcaaaaccgtgatcaacttcgac
aatgcgatcattgcagcgggttctcgcccgatccaactgccgtttattccgcatgaagat
ccgcgtatctgggactccactgacgcgctggaactgaaagaagtaccagaacgcctgctg
gtaatgggtggcggtatcatcggtctggaaatgggcaccgtttaccacgcgctgggttca
cagattgacgtggttgaaatgttcgaccaggttatcccggcagctgacaaagacatcgtt
aaagtcttcaccaagcgtatcagcaagaaattcaacctgatgctggaaaccaaagttacc
gccgttgaagcgaaagaagacggtatttatgtgacgatggaaggcaaaaaagcaccagct
gaaccgcagcgttacgacgccgtgctggtagcgattggtcgtgtgccgaacggtaaaaac
ctcgacgcaggcaaagctggcgtggaagttgacgaccgtggtttcatccgcgttgacaaa
cagctgcgtaccaacgtaccgcacatctttgctatcggcgatatcgtcggtcagccgatg
ctggcacacaaaggtgttcacgaaggtcacgttgccgctgaagttatcgccggtaagaaa
cactacttcgatccgaaagttatcccgtccatcgcctataccgaaccagaagttgcatgg
gtaggtctgactgagaaagaagcgaaagagaaaggcatcagctatgaaaccgccaccttc
ccgtgggctgcttctggtcgtgctatcgcttctgactgcgcagacggtatgaccaagctg
attttcgacaaagaatctcaccgtgtgatcggtggtgcgattgttggtaccaacggcggc
gagctgctgggtgaaatcggcctggcaatcgaaatgggttgtgatgctgaagacatcgca
ctgaccatccacgcgcacccgactctgcacgagtctgtgggcctggcggcagaagtgttc
gaaggtagcattaccgacctgccgaacccgaaagcgaagaagaagtaa
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