Shigella flexneri 8401 (serotype 5b): SFV_0460
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Entry
SFV_0460 CDS
T00377
Symbol
ybbI
Name
(GenBank) putative transcriptional regulator
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_0460 (ybbI)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sfv01504
]
SFV_0460 (ybbI)
Transcription factors [BR:
sfv03000
]
Prokaryotic type
Helix-turn-helix
MerR family
SFV_0460 (ybbI)
Antimicrobial resistance genes [BR:
sfv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
SFV_0460 (ybbI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
DUF1836
Phytochelatin
Motif
Other DBs
NCBI-ProteinID:
ABF02727
UniProt:
Q0T799
LinkDB
All DBs
Position
487962..488372
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AA seq
136 aa
AA seq
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MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNL
EESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDCADC
PIIEISPPAVIIGQGD
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcagcgatgtagcaaaaattaccggcctgaccagcaaagccattcgcttctat
gaagagaaggggctggtgacgccgccgatgcgcagcgaaaacggttatcgcacctacacg
cagcagcatctcaacgaactgaccttactgcgccaggcacggcaggtgggctttaacctg
gaagagagcggcgagctggtgaatctgtttaacgacccgcagcggcacagcgccgacgtc
aaacggcgcacgctggagaaggtggcggagatcgaacgacacattgaggagctgcaatcc
atgcgcgaccagctgctggcactggcgaatgcctgccctggcgatgactgcgccgactgc
ccgattatcgaaatctctccgcctgctgtcatcatcgggcagggtgattaa
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