Shigella flexneri 8401 (serotype 5b): SFV_0515
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Entry
SFV_0515 CDS
T00377
Symbol
ybdE
Name
(GenBank) putative inner membrane component for iron transport
KO
K07787
copper/silver efflux system protein
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFV_0515 (ybdE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfv02000
]
SFV_0515 (ybdE)
Transporters [BR:
sfv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SFV_0515 (ybdE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
ABF02774
UniProt:
Q0T752
LinkDB
All DBs
Position
541557..544736
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AA seq
1059 aa
AA seq
DB search
MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQI
VENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGK
LPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASV
GGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQTL
DDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIAELNGEGEVAGGVVILRSGKNAREV
IAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHV
RSALVAIISLPLGLCIAFIVMPFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEE
WQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGQEGQEGQE
GQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGKIPPESSNPLNRFLIRVYHPL
LLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASM
LQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMVETTIQLKPQDQWRPGMTMDKIIEE
LDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIGIKVSGTVLADIDAMAEQIEEVARTVP
GVASALAERLEGGRYINVEINREKAARYGMTVADVQLFVTSAVGGAMVGETVEGIARYPI
NLRYPQSWRDSPQALRQLPILTPMKQQITLADVADVKVSTGPSMLKTENARPTSWIYIDA
RDRDMVSVVHDLQKAIAEKVQLKPGTSVAFSGQFELLERANHKLKLMVPMTLMIIFVLLY
LAFRRVGEALLIISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYL
RHAIEAEPSLNNPQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEV
MSRIAAPMIGGMITAPLLSLFIIPAAYKLMWLHRHRVRN
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatggattattcgtcgctcggtggcgaaccgttttttggtgctgatgggcgcg
ttgtttctgagcatctggggcacctggaccatcattaatacgccagtggatgcgttgccg
gatctctccgatgtgcaggtgattattaaaaccagctatcccggccaggcaccgcaaatc
gttgaaaatcaggtgacttatccgctaaccaccaccatgttgtcggtgcctggcgcgaag
actgtgcgtggtttctcgcagtttggcgactcttatgtgtatgtcattttcgaagatggc
accgatccgtactgggcgcgttcgcgggtgctggagtacctcaaccaggtacagggtaag
ctgcctgcgggagtcagcgccgagctgggaccagatgccacgggtgttggctggatctat
gaatatgcactggtggatcgcagcggtaagcacgatcttgccgatttacgctcattgcag
gactggtttctcaaatatgagctgaaaaccattcctgacgttgcggaagtggcgtcggta
ggcggtgtggtgaaagagtatcaggtggttatcgatcctcagcgcctggcgcagtatggc
atcagtctcgccgaagtaaaaagcgcgctggatgcttcaaaccaggaagcgggcggttcg
tcaatcgaactggcggaagcagaatatatggtgcgcgccagcggctatctacaaacgctc
gacgactttaatcacatcgttttaaaagccagtgaaaatggcgtgcccgtttatctgcgc
gatgttgcgaaggtccagattggcccggagatgcgccggggcattgccgaactaaacggc
gaaggcgaagtggcgggcggggtggtgatcctgcgatccggcaaaaacgcccgagaagtg
atcgccgccgtgaaggacaaactggaaacgctgaaaagtagtctgccggaaggcgtggag
atagttacaacatacgaccgcagccagctcattgaccgggccatcgacaacctcagcggc
aagttgctggaagagtttattgtggtggcggtagtctgcgcgctgtttctctggcatgtg
cgctcggcgctggtggcgattatttcgttgccgctggggttgtgtattgcttttattgtc
atgcccttccaggggctgaatgccaatattatgtcgctgggtggcattgcgattgccgtc
ggggcgatggtcgatgccgctatcgtcatgatcgagaatgcgcataaacggctggaagag
tggcagcaccagcatcctgacgccacgctggataataaaacgcgctggcaggtgatcacc
gatgcgtctgttgaagtggggccggcgctgtttatcagtctgctgattatcacgttgtcg
tttatcccgatcttcaccctggaagggcaggaagggcaggaagggcaggaagggcaggaa
gggcaggaagggcgtctgtttggcccgttggcgttcaccaaaacgtatgcgatggcgggt
gcggcgctgctggcgatcgtagtgatccctatcctgatgggttactggatccgtggcaaa
attccgccggaaagcagtaatccgctcaatcgctttttgattcgtgtttatcatccgctg
ttgctgaaagtactgcactggccgaaaaccacgctgctggtggcggcgctttcggtgctg
acggttctctggccgctcaataaagttggcggggaatttttaccgcagatcaatgaaggc
gacttgttgtatatgccatcgacgctgccggggatttccgcagcagaggcggcgagtatg
ctgcaaaaaaccgacaagctaattatgagcgtacctgaagtggcgcgggtatttggcaaa
accgggaaagcggaaaccgccaccgattctgctccgctggagatggtagaaacgaccatc
cagcttaagccacaggatcagtggcggccaggcatgacaatggacaaaatcattgaggaa
ctggataacaccgtgcgtctgccggggctggcgaatctgtgggtgccgccaattcgtaac
cgtatcgatatgctctcaaccggcattaaaagccccatcggcattaaagtttccggcact
gtgctggcggatatcgacgcgatggctgagcaaattgaagaagtggcgcgaacggtgcca
ggcgtagcttctgcgcttgccgagcggctggaaggtgggcgctatatcaacgttgagatt
aaccgtgaaaaagccgcacgttacggtatgacggtggcggatgtgcagttgtttgtgact
tctgcggtgggcggggcgatggttggcgaaacggtggaagggattgcccgttatccaatt
aatctgcgttatccgcaaagctggcgcgatagtccgcaggcactgcgccagttgccgatc
ctgacgccgatgaagcagcaaatcaccctggcagacgtggccgacgttaaagtctctacc
ggaccgtcgatgctgaaaaccgagaatgcgcgcccgacgagctggatttatatcgatgcc
cgcgatcgtgatatggtgtcggtggttcacgatttgcaaaaagcgatagctgaaaaagtg
cagttaaaaccgggcaccagcgtggcattctccgggcagttcgagctactggagcgcgcc
aaccataagctgaaactcatggtgccgatgacactgatgatcatcttcgtgctgttgtat
ctggcattccgtcgggtgggcgaagcgttgctgattatcagcagcgtaccgtttgcgctg
gtgggcggcatctggttactgtggtggatgggctttcatctttctgtggcgacgggtacc
ggctttattgcccttgccggggtcgccgccgaatttggcgtggtgatgctgatgtattta
cgtcacgccatagaggccgagccgtcgttgaataatccacaaacattcagcgagcagaag
ctggatgaggcgttgtatcacggcgcggtcctgcgcgtgcgcccgaaagcgatgacggtg
gcggtgattatcgccggtctgctgccgattctgtggggaacgggggctggttcagaggtg
atgagccggattgccgcaccgatgattggcggcatgatcaccgcacctttgctgtcgctg
tttattatcccggcggcgtataagctgatgtggctgcaccgacatcgggtacggaattaa
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