Shigella flexneri 8401 (serotype 5b): SFV_0627
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Entry
SFV_0627 CDS
T00377
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfv03400
]
SFV_0627 (phrB)
Enzymes [BR:
sfv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SFV_0627 (phrB)
DNA repair and recombination proteins [BR:
sfv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SFV_0627 (phrB)
Prokaryotic type
SFV_0627 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABF02877
UniProt:
Q0T6U9
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All DBs
Position
complement(659248..660666)
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AA seq
472 aa
AA seq
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MTTHLAWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWETHNMSPRQAELINAQLN
GLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVDVERA
LRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGMPECVAAPKVRSSGS
IKPAPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCENGAGEYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSELIWREFYRHLMTYYPSLCKHRPFIA
WTDRVQWQSNPAHLQAWQKGKTGYPIIDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPITQGEKFDREGEFIRRWL
PELRDVPGKAVHEPWKWAQKAGVKLDYPQPIVEHKEARVQTLAAYEAARKGK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactacccatctggcctggtttcgccaggatttacgtctgcacgataatctcgcactg
gctgccgcctgccgcaattcgtctgcacgcgtgctggcgctgtatatcgctacaccacgc
cagtgggagacgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaat
gggctacaaatcgcgctggcggaaaaaggtattcctttattgttccgtgaagtggatgac
tttgtcgccagtgtcgaaatagttaaacaggtgtgcgcggaaaacagcgttactcatctt
ttttataactatcagtatgaggtgaatgagcgagcgcgggatgtggacgttgaaagagcg
ctgcgtaacgtggtgtgtgaaggatttgatgacagcgtgatcctgccgccgggggcggtg
atgaccggcaatcacgagatgtacaaagtctttacgccttttaagaatgcctggctgaaa
cggctgcgggaagggatgccggagtgcgtcgctgcaccaaaagttcgtagtagcggatcg
ataaagcccgcgccatccattacgctgaattatcctcgtcagtctttcgatactgcgcat
ttcccggtggaagaaaaagcggcgattgcgcaattacgccagttttgcgagaacggtgct
ggagagtatgagcaacaacgagattttccggcagtggaaggcaccagccgtttgtccgcc
agcttggcaacgggcgggttatcgcctcgccagtgtttgcatcgcttgttggcggaacag
ccgcaggcgctggacggtggggccggtagtgtctggcttagtgagctgatctggcgcgag
ttctaccgtcatctgatgacgtattacccctcgttgtgtaaacatcgtccatttattgcc
tggacggatcgtgtgcagtggcaaagcaatcccgcacatttacaggcctggcagaaaggc
aaaacgggatacccgattattgatgccgctatgcgtcagcttaacagcactggctggatg
cataaccggctacggatgattacagccagttttctggtgaaagatttgttgatcgactgg
cgcgaaggcgagcgatatttcatgtcgcagctgattgatggtgatttggcagctaataac
ggtggctggcagtgggcggcttctacgggtactgatgctgcgccgtattttcgtattttc
aatccgataactcagggcgagaaatttgaccgtgagggcgagtttattcgtcgatggtta
ccggagctgcgcgatgtaccagggaaagcggtgcatgagccgtggaagtgggcgcagaaa
gcaggtgtgaagctggattatccgcaaccgatagtcgagcacaaagaggcgagagtacaa
acgttggcagcgtatgaggcggcgcggaaggggaaataa
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