Shigella flexneri 8401 (serotype 5b): SFV_0630
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Entry
SFV_0630 CDS
T00377
Name
(GenBank) putative Rhs-family protein
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
Beta-prop_WDR19_1st
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
ABF02880
UniProt:
Q0T6U6
LinkDB
All DBs
Position
complement(662026..666690)
Genome browser
AA seq
1554 aa
AA seq
DB search
MEEAFWAARQGDALLHTSFMADVLGAVLEVAANVVIDALIVGTTSLLATSVGITMGCTAV
VLTGFVAGVAMVYTGVTEKVSEACSALANMLFPPQIEGYILTGSGDTWINSKPAARAAAT
AASRQDIEAQEAQAKAEQEEAQRQEDARTFRDVAGEYLEMAGAIALAVNPVTGPVLMSRA
LHDQLSTEEGRSEMVDGVTHFVSELWQPTVASAAPGSTPPPDDKIDCHKHPSSLTQFLAQ
KKAAFLDDPLGTALNLLNPGGMLETAFQGVNAVIGSISNLFKGDDEPPAAEYIAEGARDV
RINSQPATRSGARCTCEARVVNEPGNGAFVSPDVRIGGPLLVVRDIRSGRSQITLVATVA
LMFLRPGKMLSKIACFAASVGMSMLTQKATSALPHPVNAATGAKYLADDDDFDFSLPGHF
PLDWQRVYSSRDERTEGMFGQGWSVMYEVSLVCTPGSADENCMTFVSGMGRRLDMEAVLP
GGGFYSPGEGLAVRRGEQGHWLISSDDGQCFLFEADPHHPQRQRLKMLGDRNSNCLNLYY
DDRGRIVEISGEQQRPCIRLYYELAAHPRRVTQIYQHFPETAPLLLRRYSYDEAGHLNGV
YDSTGHLLREFAYDENHCMTLHRQPGGEGYYYQWGWYEGPDDAAWRVTGHHTDSGEQYRL
AWDLAQRRLCVTDGLGRTRYHQWDAQNQVTAYQDEAGQVTTFRWSDEERLLLGMTDPQGG
KWRYVYDLQGHITETHDPLGRVEQAQWHPVWHQPETEVDAAGNTWRCVYDERGNLLAVTD
PLQQNTRYQYDHHGQVVQITDARGGNKYLQWNEDGQLMRHTDCSGSQTAWFYDERTRLIR
MTDAQSHSTRYGYDDSGHLTEVILADGRTVNYQSDAAGRLVKYTSPMGRITRWQRDGQGR
VRSRTDAMGRRTAFGYDAYGRLVTLTNENGERYRFRHDVLDRLAEQINPDGCRQSYRYNA
LNAVTEVVFTGDRGGEIRHRLARDAAGRLTAKETADGRTEYVHDAADQLLEIRRQRHETD
APEVIRFSYDRLGRMLSEETAQGILTHQYDKLGNRTATTFPDGRTQRHLYYGSGHLQQIN
LDREVISEFTRDHLHREVLRSQGRLSTRQLYDPGGRLKRRETYSGMRGVVPETFTDRQYS
YSGEDELLKTRHSRRGETDYFYDPTGRITACRSEDEGYLASWQYDAAGNLLGRRAGERAT
AENSVVPFNRLMSYRGVHYRYDEFGRAVEKEGRSGTQSYRYDAEHRMVEVTTARGTYRYV
YDALGRRTEKQHISPDGKPYNRTKFLWDGMRLAQESRPEGTGSLYIYRDQGSYEPLARVD
KAGKEDPNRILYFHTDVNGAPEEMTDSDGKIVWETGYQVWGNTIQEKDHGGVEQNLRYQG
QYLDRETGLHYNLHRYYDPDVGRFMVTDPIGLRGGLNLYSYAPNPLKYADPLGLTPCAVS
NQKANRLLDSSETKVTVRSRSDAEQLFMDRYLGHNYKNMTGESGPSTKNLMEYLTGNKTK
AGSYHWDDIKDPSVTKPSYRVSGHGPGNPDGDLPHLQVHQHGGSVRHIFFPWET
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcattctgggcggcaagacagggtgatgccctgctgcatacgtcgtttatg
gcagatgtgctgggggcggtgctggaggtggccgcaaatgtcgttattgatgccctcatt
gtcggcacaacctcgttactggcgacgtcagtggggatcacgatggggtgcacggccgtc
gtgctgaccggttttgtggcgggtgtggcgatggtgtacaccggcgtgacagaaaaggtc
agcgaagcctgttcagccctcgcaaatatgcttttcccgcctcagattgaaggttacatc
ctcaccggctctggtgacacatggatcaacagcaaacctgccgcgcgggcagcggcgact
gcggcatcgcggcaggacatagaggcgcaggaagcgcaggcgaaggcagaacaggaagaa
gcgcagcgtcaggaggatgccagaacgttccgggatgtggccggggaatatctggaaatg
gcgggggccatagccctggcggttaacccggtgacagggcctgtgctgatgtcccgggct
ctgcacgaccagctcagtacggaagaagggcgttctgaaatggtggatggcgtgacacat
tttgtgtcggaactatggcagcccactgtggccagtgcggccccgggatccaccccgccc
cctgacgataaaatcgactgccataaacatccttcctcactgacgcagtttctcgcacaa
aaaaaagccgcctttctggatgaccccctaggaacggcccttaacctgctgaatccgggc
ggtatgctggaaaccgcctttcagggagtgaatgcggttattggcagcatcagtaatctg
ttcaaaggcgatgacgagccgcccgcagcggaatatatcgcggaaggcgcgcgggatgtg
cgtatcaacagccagccggcgacacgcagcggggcacgctgtacctgcgaggccagggtg
gtgaatgagccggggaacggggcgtttgtgtcaccggatgtgcgcattggcggtccgtta
ctggtggtcagggatatcagaagcggcaggtcgcagataaccctagtggcaaccgtggcg
ctgatgtttcttcgcccgggcaaaatgctttctaaaatcgcctgttttgctgccagtgtc
gggatgagcatgctgacgcagaaggccaccagtgcccttccgcatccggtcaatgccgcc
accggggccaaatacctggccgatgacgatgacttcgatttcagtctgccgggccacttt
ccgctggactggcagcgcgtgtacagcagtcgtgacgaacgtacggaaggaatgtttggt
cagggctggagtgtaatgtatgaagtcagcctcgtgtgcacaccgggtagcgcagacgaa
aactgcatgacctttgtgtcgggcatggggcgacgcttggatatggaagccgtactgccg
gggggcgggttttacagccccggtgaagggctggcggtaaggcgtggtgagcaggggcac
tggcttatcagcagcgatgacgggcagtgttttctgtttgaggctgacccgcaccacccg
cagcgccagcggctgaaaatgctgggcgaccgtaacagcaactgtctgaatctgtactac
gacgaccggggccgcattgtggaaatcagcggcgaacagcagcgtccgtgcatccgtctg
tattacgaactggcggcgcatccccggcgggtgacacagatttatcagcatttccctgag
actgcacctttactgctgcgtcgttacagctatgacgaggccggccacctgaacggcgtg
tacgacagcacggggcacctgctgcgtgagtttgcttacgacgaaaaccactgcatgacg
ctgcaccgccagccgggcggcgaagggtattattaccagtggggctggtatgaaggtccg
gatgacgcggcatggcgggtgacggggcaccacacggacagcggtgaacagtaccggctg
gcgtgggacctggcgcagcgcaggctgtgcgtgacggacggactggggcgcacacgttat
caccagtgggatgcgcagaatcaggtgacggcgtaccaggacgaagccggacaggtgacg
acattccgctggagcgacgaagaacgactgttgctggggatgaccgaccctcagggcggc
aaatggcgctatgtgtatgacctgcaggggcatatcacggagacgcacgacccgctgggg
cgggtggagcaggcgcagtggcacccggtgtggcaccagccggaaacggaggtggacgcg
gcgggaaacacctggcgctgtgtgtacgatgaacgcggcaaccttcttgccgtgaccgac
ccgctgcagcagaacacccggtatcagtatgaccaccacggccaggtggtgcagataacg
gatgcgcgcggggggaataaatacctccagtggaatgaagacgggcagctcatgcggcac
acggactgttccggctcgcagacggcgtggttctacgacgaacgcacgaggcttatcaga
atgacggatgcgcagagccacagcacgcgctacgggtatgacgacagcggtcatctgacg
gaggtgatactggcggacggccgcacggtgaattaccagtcagacgcggcgggcaggctg
gtaaagtacaccagcccgatggggaggataacgcgctggcagcgggacgggcagggccgg
gtgcgcagccggacggacgcgatggggcgcaggacggcattcgggtacgacgcttacggg
cgtctggtcacgctcacgaacgagaacggagaacgctaccggttccgccatgatgtgctg
gaccgtctggcggagcagataaacccggacggctgccgccagtcgtaccgctacaacgcg
ctgaacgcggtcacggaagtggtgttcaccggggaccggggcggtgaaatccgccaccgg
ctggcgcgtgatgcggcgggccggctcacggcaaaagagacagccgatggccgtacggaa
tacgtccatgatgcggcagaccagctactggaaatccgtcgccagcggcacgaaactgac
gcgccggaagttatccgcttcagctacgacagactggggcggatgctgagcgaggagacg
gcgcagggcatcctgacccaccagtacgataaactgggcaaccggactgccaccaccttt
ccggacggcagaacgcagcgccatctgtactacggcagcggccatctccagcagataaat
ctggaccgggaggtcatcagcgagttcacgcgcgaccacctgcaccgtgaagtgctcaga
agccaggggcgactgagcacgcggcagctttacgaccccggcgggcggctgaagcgcagg
gagacatacagcgggatgcgcggggtggtaccggagacgttcacggaccggcagtacagc
tacagtggcgaggatgaactgctgaagacgcggcacagccggcggggggaaacggattac
ttctacgaccccacggggcgcatcacggcgtgtcgttcggaggatgaggggtatctggcg
agctggcagtacgacgcggcgggaaacctgctggggaggcgcgcgggggaaagggccacg
gcagaaaacagcgtggtgccgttcaaccggctgatgtcttaccgtggtgtgcactaccgt
tatgacgaatttggccgtgcggtggaaaaggagggccggagcggaacgcagagttaccgt
tatgatgcggaacaccggatggtggaagtgacgacagcgcgggggacataccggtatgtg
tacgatgcactggggaggcggacggaaaaacagcacatcagccctgacggtaagccgtac
aaccggacaaaatttttatgggacggaatgcggctggcgcaggagagcaggccggaggga
acaggcagcctgtacatctacagggaccaggggagttatgaaccgctggcgcgggtggat
aaggcgggcaaagaggacccgaaccggatactgtattttcacacggatgtgaacggcgcg
ccggaagagatgacggacagcgacgggaaaatcgtgtgggagacggggtatcaggtctgg
ggtaacacgatacaggagaaggaccacggcggggtggagcagaacctgcgctaccaggga
cagtacctcgacagggaaacggggctgcactacaatctgcacaggtactatgatccggat
gtcgggcggttcatggtaactgacccgatagggttgagaggcggtttaaatctctacagt
tatgcacctaatcctctaaaatatgctgatccacttggattaactccatgtgctgttagt
aaccaaaaagcgaatcgtttattagatagtagtgaaaccaaagttactgttaggtctaga
agtgacgctgaacaattgtttatggatagatatttaggtcataattataaaaatatgaca
ggtgagtcaggccccagcactaagaacttaatggaatatcttactggaaataaaacaaaa
gcaggttcatatcattgggatgatataaaagatccttctgtaacaaaaccttcatataga
gtgtcaggtcatggaccaggaaatcctgatggtgatttaccacatttacaagttcatcaa
catggtggaagtgttagacatatatttttcccgtgggagacataa
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