Shigella flexneri 8401 (serotype 5b): SFV_0800
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Entry
SFV_0800 CDS
T00377
Name
(GenBank) putative toxin
KO
K11924
DtxR family transcriptional regulator, manganese transport regulator
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_0800
Transcription factors [BR:
sfv03000
]
Prokaryotic type
Helix-turn-helix
Other families
SFV_0800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
MarR
HTH_24
HTH_Crp_2
MarR_2
GntR
TrmB
HTH_IclR
DUF7343
HTH_1
HTH_DeoR
DUF4423
HTH_5
HTH_50
HTH_23
HTH_37
HTH_27
HTH_PafC
DUF2250
HTH_AsnC-type
HTH_36
KORA
YdaS_toxin
Rrf2
LexA_DNA_bind
HTH_6
HTH_45
HTH_11
FeoC
DUF2089
HTH_3
STD1
AbiEi_4
HTH_10
DUF6429
Motif
Other DBs
NCBI-ProteinID:
ABF03031
UniProt:
Q0T6E5
LinkDB
All DBs
Position
833224..833691
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AA seq
155 aa
AA seq
DB search
MSRRAGTPIAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDM
AARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLG
VSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcgcgcaggtacgccaatagcaaaaaaagtgacgcagttagtgaacgtggaa
gagcacgttgaagggttccgccaggtcagagaggcgcatcggcgcgagcttattgatgat
tacgttgagctgatttctgacttgatcagggaagtgggggaagctcgtcaggtggacatg
gctgctcgtctgggagtttcgcaaccgacggtggctaaaatgcttaagcggctggcaacc
atggggctgattgaaatgatcccctggcgtggcgtgtttttaacggcagaaggagagaag
ctggcgcaggaaagccgcgagcgacatcagatagtcgaaaatttcttgttggtgttgggc
gtcagtccggaaatcgcccgtcgcgacgcggaaggcatggagcaccatgttagtgaagag
acgctcgacgcttttcgtttgtttacccagaaacacggtgccaaatga
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