Shigella flexneri 8401 (serotype 5b): SFV_0927 Help Entry SFV_0927          CDS       T00377                                  Symbol ycbB Name (GenBank) putative amidase   KO K21470   L,D-transpeptidase YcbB Organism sfv  Shigella flexneri 8401 (serotype 5b) Brite KEGG Orthology (KO) [BR:sfv00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:sfv01002]     SFV_0927 (ycbB)    01011 Peptidoglycan biosynthesis and degradation proteins [BR:sfv01011]     SFV_0927 (ycbB) Peptidases and inhibitors [BR:sfv01002]  Cysteine peptidases   Family C82    SFV_0927 (ycbB) Peptidoglycan biosynthesis and degradation proteins [BR:sfv01011]  Peptidoglycan biosynthesis and degradation   Transpeptidase    SFV_0927 (ycbB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  YkuD Scaffold PG_binding_1 DUF4389 Motif Other DBs NCBI-ProteinID:  ABF03149 UniProt:  Q0T6B6 LinkDB All DBs Position 973208..975055 Genome browser AA seq 615 aa AA seqDB search MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL AEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPIKGTRWLYSSKP YALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMD KQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA LNIQRLRLLPTELSTGIMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLP FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSDCVRVNKASDLANM LLQDAGWNDKRISDARKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYDLPA RSSSQIVSKAEQLIR NT seq 1848 nt NT seq  +upstreamnt  +downstreamnt atgttgcttaatatgatgtgtggtcgtcggctgtcggcaatcagtttgtgcctggccgta acattcgctccactgttcaatgcgcaggccgatgagcctgaagtaatccctggcgacagc ccggtggctgtcagtgaacagggcgaggcactgccgcaggcgcaagccacggcaataatg gcggggatccagccattgcctgaaggtgcggcagaaaaagcccgcacgcaaatcgaatct caattacccgcaggttacaagccggtttatcttaaccagcttcaactgttgtatgccgca cgcgatatgcaacccatgtgggaaaaccgtgatgctgttaaagccttccagcaacagctg gcagaggtggcgattgctggtttccagccgcagtttaataaatgggtagagttactgacc gatcctggtgttaacgggatggcacgtgacgtggtgctctctgatgcgatgatgggctat ctccatttcattgcaaatattccgatcaaaggcactcgctggctatatagcagtaaacct tatgcgctttcaacgccgccgctttcggtgattaaccaatggcagctagcgctggataaa ggtcaattgcctacgtttgttgcaggactggcaccgcagcatccgcaatatgcggcgatg catgaatcgttactggccttactcagtgacaccaaaccgtggccccaactgaccggcaaa gcaacgttgcgcccagggcagtggagtaacgacgtaccggcgttgcgcgaaatattgcaa cgcacaggcatgttggacggggggccgaaaattactctacctggcgatgacacgccaact gacgcggtagtcagcccatccgctgttactgttgaaacagcagaaactaagccgatggac aagcaaacgacgtctcgtagtaaacctgcgcctgccgttcgtgccgcctacgataatgaa ctggtggaagccgttaaacgttttcaggcatggcaaggattgggagcagatggtgctatt ggcccggcaacgcgtgactggttaaacgtaacgcccgcccagcgtgctggcgtgttggca ctcaacatccagcgattgcgcttgctgccaacagagctttctaccgggatcatggttaac attccagcctattcgctgctctactatcagaacggcaatcaggtgctggattcgcgagtc attgtcggtcgccccgatcgcaaaacgccgatgatgagcagtgcacttaacaacgtagtg gtaaacccgccgtggaacgtaccaccaactctggcacgcaaagatattctgccgaaagtg cgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagc agagaagcgattgacccatgggaggttgactggtctacaatcacggcctcgaatttaccg tttcgcttccagcaggctccaggcccacggaactcgctggggcgctataaattcaatatg ccgagttcagaggccatttatttgcatgacacgccgaaccacaatctgttcaagcgtgat acacgcgcattgagctcagactgtgtacgagtgaataaagcttccgatctggcgaatatg ctgttgcaggatgcaggatggaatgacaaacgtatttctgatgcgcggaagcagggtgat acacgttacgtcaatattcggcagtcgattccggtgaatctctactacctgacggccttt gttggtgcagatgatcgtacccagtatcgtacagatatttacaattatgatctgcctgcg cgatccagctcgcaaatcgtatcgaaagcggaacaattaatcaggtaa

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