Shigella flexneri 8401 (serotype 5b): SFV_1051
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Entry
SFV_1051 CDS
T00377
Symbol
csgD
Name
(GenBank) Probable csgAB operon transcriptional Regulatory protein
KO
K04333
LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_1051 (csgD)
Transcription factors [BR:
sfv03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SFV_1051 (csgD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
Sigma70_r4_2
HTH_24
HTH_40
HTH_23
Mcm-like_N
RNA_binding
DUF1799
Motif
Other DBs
NCBI-ProteinID:
ABF03264
UniProt:
Q0T601
LinkDB
All DBs
Position
complement(1096749..1097399)
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AA seq
216 aa
AA seq
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MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDM
MEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYAMEDQERVVNG
LQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSL
FISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaagtccatagtattcatggtcatacattattgttgatcactaaaccttct
ttgcaggcgacagctctcttgcagcaccttaaacaatcgctagcaattacaggaaaatta
cataatattcaacgttctctggacgatatctcttcaggctctattattcttctggatatg
atggaagcggataaaaagcttatccattattggcaggatactttgagcaggaaaaacaac
aatatcaaaatattgttgctaaatacgcctgaagattacccgtaccgcgacattgaaaac
tggcctcatatcaacggcgttttttatgccatggaggatcaagaacgtgttgtcaatggg
ttgcaaggcgtcctgcgtggcgaatgctactttacgcaaaagcttgccagttacctgatt
acacattctggtaactatcgttataacagcacggaatcagccctccttactcatcgggaa
aaagagatcctgaataagctgcgtatcggcgcgtctaataacgagatcgctcgttcgttg
ttcatcagcgaaaatacggttaaaacgcatctttataatcttttcaagaagatagccgta
aaaaaccggacacaagcggtttcctgggcaaacgataacctcaggcgataa
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