Shigella flexneri 8401 (serotype 5b): SFV_1170
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Entry
SFV_1170 CDS
T00377
Symbol
ymfC
Name
(GenBank) conserved hypothetical protein
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfv03009
]
SFV_1170 (ymfC)
Enzymes [BR:
sfv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
SFV_1170 (ymfC)
Ribosome biogenesis [BR:
sfv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SFV_1170 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABF03378
UniProt:
Q0T5N7
LinkDB
All DBs
Position
complement(1214339..1214992)
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AA seq
217 aa
AA seq
DB search
MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKHENQPTRVILFNKPYDVLPQFTDETGR
KTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQD
ALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQV
RRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaattcataatctctgaaaataccatgcaaaaaacttcttttagaaatcaccag
gttaagcgattcagctcgcaacgttctaccaggcgtaaacatgaaaaccagcccacgcgt
gtgatcctcttcaataaaccctacgatgttcttccgcagttcaccgatgaaaccggacgc
aaaacattaaaagaattcatcccggttcagggcgtttatgcagcaggtcgccttgaccgc
gatagcgaagggttgctggtgctgaccaataacggcgcgttgcaggcgcgtttaacccag
ccgggtaaacgcaccggaaaaatctattatgtgcaggtggaaggtattcccacacaagac
gcacttgaagccttgcgcaatggcgtaaccttaaatgatggccctaccctgcccgcaggc
gcggagctggttgacgaacccgcgtggttatggccgcggaatccaccaattcgtgaacgc
aaaagtattcccaccagctggctgaagatcaccttatatgaaggacgtaatcgccaggtg
cgccgcatgaccgcccatgttggtttccccacgctgcgactgattcgctatgcgatggga
gattactctttggataatcttgccaatggcgaatggcgagaagtgacagattaa
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