Shigella flexneri 8401 (serotype 5b): SFV_1424
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Entry
SFV_1424 CDS
T00377
Symbol
fadD
Name
(GenBank) acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00061
Fatty acid biosynthesis
sfv00071
Fatty acid degradation
sfv01100
Metabolic pathways
sfv01212
Fatty acid metabolism
sfv02024
Quorum sensing
sfv04146
Peroxisome
Module
sfv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SFV_1424 (fadD)
00071 Fatty acid degradation
SFV_1424 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SFV_1424 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFV_1424 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sfv01004
]
SFV_1424 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfv04147
]
SFV_1424 (fadD)
Enzymes [BR:
sfv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SFV_1424 (fadD)
Lipid biosynthesis proteins [BR:
sfv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SFV_1424 (fadD)
Exosome [BR:
sfv04147
]
Exosomal proteins
Exosomal proteins of breast milk
SFV_1424 (fadD)
Exosomal proteins of breast cancer cells
SFV_1424 (fadD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABF03617
UniProt:
Q0T4Z8
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All DBs
Position
1471047..1472765
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AA seq
572 aa
AA seq
DB search
MTTNTHFRGEELKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVM
TFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGIIVVNVNPLYT
PRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVK
YIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHR
NMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIP
GLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSCLHLSAGGGMPVQQVVAERWVKLT
GQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCV
KGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNE
IEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKL
VEFRDELPKSNVGKILRRELRDEARGKVDNKA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaacacgcattttagaggtgaagaattgaagaaggtttggcttaaccgttat
cccgcggacgttccgacggagatcaaccctgaccgttatcaatctctggtagatatgttt
gagcagtcggtcgcgcgctacgccgatcagcctgcgtttgtgaatatgggggaggtgatg
accttccgcaagctggaagaacgcagtcgcgcgtttgccgcttatttgcaacaagggttg
gggctgaagaaaggcgatcgcgttgcgttgatgatgcctaacttattgcaatatccggtg
gcgctatttggcattttgcgtgccgggataatcgtcgtaaacgttaacccgttgtatacc
ccgcgtgagcttgagcatcagcttaacgatagcggcgcatcggcgattgttatcgtgtct
aactttgcccacactctggaaaaagtggttgataaaaccgccgttcagcacgtaattctg
acccgtatgggcgatcagctatctacggcaaaaggcacggtagtcaatttcgttgttaaa
tacatcaagcgcttggtgccgaaataccatctgccagatgccatttcatttcgtagcgca
ctgcataacggctaccggatgcagtacgtcaaacccgaactggtgccggaagatttagcc
ttcctgcaatacaccggcggcaccacaggtgtggcgaaaggcgcgatgctgactcaccgc
aatatgctggcgaacctggaacaggtcaacgccacctatgggccgttgctgcatccaggt
aaagaactggtagtaacggcactgccgctgtatcacatttttgccctgaccattaactgc
ctgctgtttatcgaactgggtgggcagaacctgcttatcactaacccgcgtgatattcca
gggttggtaaaagagttagcgaaatatccgtttaccgctatcactggcgttaacaccttg
ttcaatgcgttgctgaacaataaagagttccagcagctggatttctcctgtctgcatctt
tccgcaggcggtgggatgcctgttcagcaagtggtggcagaacgctgggtgaaactgacc
ggacagtatctgctggaaggttatggcctgaccgagtgcgcgccgctggtgagcgttaac
ccgtatgatattgattatcatagcggtagcatcggtttgccggtgccatcgacggaagcc
aaactggtggatgacgacgacaacgaagtaccaccgggtcaaccgggtgagctttgtgtc
aaaggaccgcaggtgatgctgggttactggcagcgtccggatgctacagatgagatcatc
aaaaatggctggttacacaccggcgacatcgcggtgatggatgaagaaggattcctgcgc
attgtcgatcgtaaaaaagacatgattttggtttccggttttaacgtctatcccaacgag
attgaagatgtcgtcatgcagcatcctggcgtacaggaagtcgcggctgttggcgtacct
tccggctccagtggtgaagcggtgaaaatcttcgtagtgaaaaaagatccatcgcttacc
gaagagtcactggtgactttttgccgccgtcagctcacgggatacaaagtaccgaagctg
gtggagtttcgtgatgagttaccgaaatctaacgtcggaaaaattttgcgacgagaatta
cgtgacgaagcgcgcggcaaagtggacaataaagcctga
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