Shigella flexneri 8401 (serotype 5b): SFV_1942
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Entry
SFV_1942 CDS
T00377
Symbol
araH
Name
(GenBank) ABC-type arabinose transport system, permease component
KO
K10538
L-arabinose transport system permease protein
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SFV_1942 (araH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfv02000
]
SFV_1942 (araH)
Transporters [BR:
sfv02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
SFV_1942 (araH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PDR_CDR
Motif
Other DBs
NCBI-ProteinID:
ABF04089
UniProt:
Q0T3M6
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Position
complement(1987515..1988501)
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AA seq
328 aa
AA seq
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MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISM
SGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGVLCGLVN
GFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLT
VACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILA
SRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISP
FAQYVVRGLILLAAVIFDRYKQKAKRTV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtttctacatcggggtctggcgcacctaagtcgtcattcagcttcgggcgt
atctgggatcagtacggcatgctggtggtgtttgcggtgctctttatcgcctgtgccatt
tttgtcccaaattttgccaccttcattaatatgaaagggttgggcctggcaatttccatg
tcggggatggtggcgtgtggcatgttgttctgccttgcttccggtgactttgacctttct
gtcgcctccgtaattgcctgtgcgggtgtcaccacggcggtggttatcaacctgactgaa
agcctgtggattggcgtggcagcgggtttgttgctgggcgttctctgtggcctggtcaat
ggctttgttatcgccaaactgaaaataaatgctctgatcacgacactggcaacgatgcag
attgttcgaggtctggcgtacatcatttcagacggtaaagcggtcggtatcgaagatgaa
agcttctttgcccttggttacgctaactggttcggtctgcctgcgccaatctggctcacc
gtcgcgtgtctgattatctttggtttgctgctgaataaaaccacctttggtcgtaatacc
ctggcgattggcgggaacgaagaggctgcgcgtctggcgggtgtaccggttgttcgcacc
aaaattattatctttgttctctctggcctggtatctgcgatagccggaattattctggct
tcacgtatgactagtgggcagccaatgacgtcgattggttatgagcttattgttatctcc
gcctgcgttttaggtggcgtttctctgaaaggtggcatcggaaaaatctcatatgtggtg
gcgggtatcttaattttaggcaccgtggaaaacgccatgaacctgcttaatatttctcct
ttcgcgcagtacgtggttcgcggcttaatcctgctggcagcggtgatcttcgaccgttac
aagcaaaaagcgaagcgcactgtctga
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