Shigella flexneri 8401 (serotype 5b): SFV_1944
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Entry
SFV_1944 CDS
T00377
Symbol
araF
Name
(GenBank) L-arabinose-binding periplasmic protein
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SFV_1944 (araF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfv02000
]
SFV_1944 (araF)
Transporters [BR:
sfv02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
SFV_1944 (araF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
DUF1651
Motif
Other DBs
NCBI-ProteinID:
ABF04091
UniProt:
Q0T3M4
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All DBs
Position
complement(1990095..1991084)
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AA seq
329 aa
AA seq
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MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIK
IAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG
KPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMD
ALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATE
GQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVET
PKFTEVTDVVLITRDNFKEELEKKGLGGK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaatttactaaagccctggcagccattggtctggcagccgttatgtcacaatcc
gctatggcggagaacctgaagctcggttttctggtgaagcaaccggaagagccgtggttc
cagaccgaatggaagtttgccgataaagccgggaaggatttagggtttgaggttattaag
attgccgtgccggatggcgaaaaaacattgaacgcgatcgacagcctggcagccagtggc
gcaaaaggtttcgttatttgtactccggacccgaaactcggctctgccatcgtcgcgaaa
gcgcgtggctacgatatgaaagtcattgcagtggatgaccagtttgttaacgccaaaggt
aagccaatggataccgttcctctggtgatgatggcggcgactaaaattggcgaacgtcag
ggccaggaactgtataaagagatgcagaaacgtggctgggatgtcaaagaaagcgcagtg
atggcgattaccgccaacgaactggataccgcccgccgccgtacaacgggttctatggac
gcactgaaagctgcaggattcccggaaaaacaaatttatcaggtacctaccaaatctaac
gacatcccgggggcatttgacgctgccaactcaatgctggttcaacatccggaagttaaa
cattggctgatcgtcggtatgaacgacagcaccgtacttggcggcgtacgtgcaaccgaa
ggtcagggctttaaagcagccgatatcatcggtattggtattaacggtgtggatgcagta
agcgaactgtctaaagcacaggcaaccggcttctacggttccctgctgccaagcccggac
gtacatggctataaatccagcgaaatgctttacaactgggtagcaaaagacgttgaaacg
ccaaaatttaccgaagttacagacgtggtactgatcacgcgtgacaactttaaagaagaa
ctggagaaaaaaggtttaggcggtaagtaa
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