Shigella flexneri 8401 (serotype 5b): SFV_2002
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Entry
SFV_2002 CDS
T00377
Symbol
dcm
Name
(GenBank) DNA cytosine methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00270
Cysteine and methionine metabolism
sfv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SFV_2002 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_2002 (dcm)
03032 DNA replication proteins [BR:
sfv03032
]
SFV_2002 (dcm)
03036 Chromosome and associated proteins [BR:
sfv03036
]
SFV_2002 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
sfv02048
]
SFV_2002 (dcm)
Enzymes [BR:
sfv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SFV_2002 (dcm)
Transcription factors [BR:
sfv03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SFV_2002 (dcm)
DNA replication proteins [BR:
sfv03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SFV_2002 (dcm)
Chromosome and associated proteins [BR:
sfv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SFV_2002 (dcm)
Prokaryotic defense system [BR:
sfv02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SFV_2002 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DNA_meth_N
LisH_WDR26
Motif
Other DBs
NCBI-ProteinID:
ABF04142
UniProt:
Q0T3H3
LinkDB
All DBs
Position
complement(2039436..2040854)
Genome browser
AA seq
472 aa
AA seq
DB search
MQENISVTDSYSTGNAAQAMLEKLLQIYDVKMLVAQLNGVGENHWSAAILKRALANDSAW
HRLSEKEFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHA
VRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF
SLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDKGKTFRI
IMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHRERIVLVGFRRDLNLKADFTLRDIS
ECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYRYAKKHQARGNGFGYGMVYPNNPQSVT
RTLSARYYKDGAEILIDRGWDMATGEKDFDDPLNQQHRPRRLTPRECARLMGFEAPGEAK
FRIPVSDTQAYRQFGNSVVVPVFAAVAKLLEPKIKQAVALRQQEAQHGRRSR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaatatatcagtaaccgattcatacagcaccgggaatgccgcacaggcaatg
ctggagaaactgctgcaaatttatgatgttaaaatgctggtggcgcagcttaatggtgtg
ggtgagaatcactggagcgcggcaattttaaaacgtgcgctggcgaatgactcggcatgg
caccgtttaagtgagaaagagtttgcccatctgcaaacgttgttacccaaaccaccggaa
catcatccgcattatgcgtttcgctttatcgatctatttgccggaattggcggcatccgt
cgtggttttgaatcgattggtggacagtgcgtgtttaccagcgaatggaacaaacatgcg
gtacgcacttataaagccaaccattattgcgacccggcgacgcatcattttaatgaagat
atccgcgacatcaccctcagtcatcaagaaggcgtgagtgatgaggcggcggcggaacat
attcgtcaacacattcctgaacacgatgttttactggccggtttcccttgtcagccattt
tcgctggctggcgtatcgaaaaagaactcgctcgggcgggcgcacggttttgcctgcgat
acccagggcacgctgttcttcgatgtggtgcgcattatcgacgcgcgtcgtccggcgatg
tttgtgctcgaaaacgtcaaaaacctgaagagtcacgataagggaaaaacgttccgcatc
atcatgcagacgctggacgaactgggctatgacgttgccgatgcagaagataacgggccg
gacgatccgaaaatcatcgatggtaaacatttcctgccgcagcaccgtgaacgcatcgtg
ctggtgggttttcgtcgcgatctgaatctgaaagccgattttactctgcgtgatatcagc
gaatgtttccctgcacagcgagtgacgctggcgcagctgctggacccgatggttgaggcg
aaatatatcctgacgccggtgctgtggaagtacctctatcgatatgcgaaaaaacatcag
gcgcgcggtaacggcttcggttatggaatggtttatccgaacaatccgcaaagcgtcacc
cgtacgctgtctgctcgttattacaaagatggcgcggaaattttaatcgatcgcggttgg
gatatggccacgggtgagaaagactttgacgatccgctgaatcagcaacatcgtccacgt
cggttaacgcctcgtgaatgcgcgcgcttaatgggttttgaagcgccgggagaagcgaaa
ttccgcattccggtttcggacactcaggcctatcgccagttcggcaactcggtggtcgtg
ccggtctttgccgcggtggcaaaactgcttgagccaaaaatcaaacaggcggtggcgttg
cgtcagcaagaggcacaacatggtcgacgttcacgataa
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