Shigella flexneri 8401 (serotype 5b): SFV_2098
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Entry
SFV_2098 CDS
T00377
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6 dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00521
Streptomycin biosynthesis
sfv00523
Polyketide sugar unit biosynthesis
sfv00525
Acarbose and validamycin biosynthesis
sfv00541
Biosynthesis of various nucleotide sugars
sfv01100
Metabolic pathways
sfv01110
Biosynthesis of secondary metabolites
sfv01250
Biosynthesis of nucleotide sugars
Module
sfv_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SFV_2098 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SFV_2098 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SFV_2098 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SFV_2098 (rfbB)
00525 Acarbose and validamycin biosynthesis
SFV_2098 (rfbB)
Enzymes [BR:
sfv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SFV_2098 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
ABF04225
UniProt:
Q0T390
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Position
complement(2119469..2120554)
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AA seq
361 aa
AA seq
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MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC
DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALND
EKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRA
WKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGEQIRDWLYVEDHA
RALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH
DRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTNWVENVKSGAYQSWIEQNYEGR
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatacttgttactggtggcgcagggtttattggttctgctgttgttcgtcacata
ataaataatacgcaagatagtgttgttaatgtcgataaattaacatacgccgggaacctg
gaatcactcgctgatgtttctgattctgaacgttatgcttttgagcatgcagatatctgc
gatgctgtagccatgtcgcgtattttcgcacagcaccagccagacgcggtgatgcacctg
gcggcagagagccacgttgaccgttcaataacgggccctgcggcatttattgaaaccaat
attgtggggacttatgttcttttagaagcggcgcgcaattactggtctgctctgaatgat
gaaaagaaaaaaagtttccgctttcatcatatttctactgatgaagtttatggtgactta
ccccatccggatgaagcaaataataacgaagcgttaccgctatttacggaaacgacagct
tacgcgccaagtagcccgtattctgcgtctaaagcttccagcgatcatttggtacgtgcc
tggaagcggacttatggtttaccaaccattgtgactaattgctcgaacaattatggtcct
tatcacttcccggaaaaacttattccattggttattctgaatgctctggaaggtaaggca
ttacctatttatggtaaaggggagcaaattcgcgactggttgtatgtagaggatcatgct
cgtgcgttatataccgtcgtaaccgaaggtaaagcgggtgaaacttataacattggtgga
cataacgaaaagaaaaacatcgacgtagtgctcactatttgtgatttgttggatgagatt
gtaccgaaagagaaatcttatcgtgagcaaattacttatgttgccgatcgcccggggcat
gaccgccgttacgccattgatgccgataaaattagccgcgaattgggctggaaaccgcaa
gaaacgtttgagagcgggattcgtaaaacggtggaatggtatctggctaatacaaattgg
gttgagaatgtgaaaagcggtgcttatcagtcgtggattgaacaaaactatgagggccgt
cagtaa
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