Shigella flexneri 8401 (serotype 5b): SFV_2116
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Entry
SFV_2116 CDS
T00377
Symbol
wcaC
Name
(GenBank) putative glycosyl transferase
KO
K13684
putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
SFV_2116 (wcaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sfv01003
]
SFV_2116 (wcaC)
Glycosyltransferases [BR:
sfv01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SFV_2116 (wcaC)
SSDB
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Paralog
GFIT
Motif
Pfam:
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Motif
Other DBs
NCBI-ProteinID:
ABF04241
LinkDB
All DBs
Position
complement(2139116..2140333)
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AA seq
405 aa
AA seq
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MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTP
RMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLNSVVRFCEKV
KNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGK
RQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRETQG
KPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKL
MSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEEEVLQ
LVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaatattctgcaatttaatgtgcgactggcggaaggcggggcagcaggtgtggcgtta
gatctccaccagcgtgcgctgcaacaggggctggcgtcacattttgtctacggctacggc
aaaggcggcaaagagagcgtcagccatcagaactatccgcaggtcatcaaacatacgccg
cggatgaccgcgatggcgaacattgcgttgtttcgtctgtttaatcgcgatctgttcggc
aatttcaatgagttatatcgcaccattactcgcacaccgggtccggtggtcctgcatttt
catgtgctgcacagctactggttgaatcttaacagcgtggtgcgcttttgcgaaaaagtg
aaaaaccataaaccggatgtcaccctggtctggacgctgcacgaccactggagtgtaacc
ggacgctgcgcctttaccgacggttgcgaaggctggaaaacgggctgccagaaatgcccg
accttaaataactatccgccggtgaagattgatcgcgcgcaccagctggtggcgggcaaa
cgccagttattccgcgagatgctggcgctgggctgtcagtttatttcccccagccagcat
gtggctgacgctttcaatagtctgtacgggccagggcgttgccggattatcaataatggc
attgatatggcaaccgaagcgattctggcagatctgcctccggtgcgcgaaactcagggc
aagccgaaaatcgcagtggtggcgcatgacctgcgttacgacggcaaaactaaccagcaa
ctggtgcgtgagatgatggcgctgggcgacaaaatcgaactgcatacctttggtaagttc
tcgccgttcaccgctggcaacgtggttaatcacggctttgaaactgacaagcgcaagttg
atgagcgcgctcaatcagatggatgcgctggtgttcagttctcgtgtcgataactacccg
ctgattttgtgtgaggcgctatcgattggcgtgccggtgattgccacccatagcgatgcg
gcgcgggaagtgctgcaaaaatccggtggtaaaaccgtcagtgaagaagaggtgctgcaa
ctggtacagttaagcaaaccggaaatcgcgcaggcgatatttggtaccacgctggctgag
ttcagccaacgcagtcgcgccgcctacagtggacaacagatgctggaggagtatgtcaac
ttctatcagaatctgtag
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