Entry |
|
Symbol |
yejH
|
Name |
(GenBank) putative ATP-dependent helicase
|
KO |
K19789 | DNA repair protein RadD |
|
Organism |
sfv Shigella flexneri 8401 (serotype 5b)
|
Brite |
KEGG Orthology (KO) [BR:sfv00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sfv03400]
SFV_2262 (yejH)
DNA repair and recombination proteins [BR:sfv03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
SFV_2262 (yejH)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2297529..2299289
|
AA seq |
586 aa
MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIEDFKAQR
FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS
LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG |
NT seq |
1761 nt +upstreamnt +downstreamnt
atgatttttacactccgcccatatcagcaagaagccgtggatgccacgctcaaccatttt
cgtcgtcataaaacccctgccgttatcgtgctgcccaccggcgcaggtaaaagcctggtg
atagcggaactggcacggctggcgcgtggtcgcgtactggtgctggcacacgttaaagaa
ctggtggcgcaaaaccatgcaaagtatcaggcgctggggctggaagccgatatttttgcc
gccgggctaaagcgcaaagagagccacggtaaagtggtatttggcagcgttcagtcggtc
gcccgtaatcttgatgcctttcagggtgaattttcgctgttgattgtcgatgaatgccac
cgtattggtgacgatgaagagagccagtatcagcaaatcctcactcacctgactaaagtg
aatccccacttacgcctgctggggctgactgccacgccttttcgattgggcaaaggctgg
atctaccagttccattatcacggcatggtacgcggcgatgagaaagcccttttccgtgac
tgcatttatgagctgccgctgcgttatatgattaaacacggctatctgacgccgccagaa
cgactggatatgccagtagtgcaatacgatttcagccgcttgcaggcacagagtaacggg
ctgttcagcgaagctgatctcaaccgtgagctgaaaaaacagcaacgcattacgccacat
atcatcagccagatcatggagttcgccgaaaagcgcaaaggggtaatgattttcgccgcc
accgttgaacacgcaaaagagattgtgggattactgcctgccgaagatgctgcactgatt
actggcgacacccccggcgctgagcgcgatgtgttaattgaagattttaaagcccagcgt
tttcgctatctggtcaacgtcgcagtactgaccaccggatttgacgccccgcacgtcgat
cttatcgccattctgcgccctaccgaatcagtgagtctttaccaacaaattgtcgggcgc
ggtctgcgtctcgctccgggcaagactgattgtttaattcttgattatgcgggtaatcct
cacgatctctacgcgccggaagttggtacaccgaaaggcaaaagtgacaacgttccggta
caggttttctgccctgcctgcggttttgccaacaccttttgggggaaaacgaccgccgac
gggacattgattgaacactttggtcgccgctgtcagggatggtttgaagatgacgacggt
catcgcgaacagtgtgacttccgtttccgttttaaaaattgcccgcaatgtaacgcagaa
aatgatattgccgctcgccgctgccgcgaatgtgacacggtactggttgatccggatgat
atgttaaaagcggcgctacgactgaaagatgcgctggtattacgctgtagcggcatgtct
ttgcagcatgggcacgacgagaaaggcgaatggttgaaaatcacctattacgatgaagac
ggcgcggatgtgagtgagcgtttccgtctgcaaacgcccgcccagcgtaccgccttcgag
cagctttttatccgcccgcatacgcgcacaccgggcatccctctgcgctggatcaccgcc
gccgatatcctcgcccagcaagccttactgcgacatccggattttgtcgtcgcccgcatg
aaaggtcagtactggcaagtgcgtgaaaaagtgttcgattacgaaggtcgttttcgtcgg
gcgcacgaattacgcggttaa |