Shigella flexneri 8401 (serotype 5b): SFV_2270
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Entry
SFV_2270 CDS
T00377
Symbol
ccmH
Name
(GenBank) possible subunit of heme lyase
KO
K02200
cytochrome c-type biogenesis protein CcmH
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
SFV_2270 (ccmH)
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Gene cluster
GFIT
Motif
Pfam:
TPR_CcmH_CycH
CcmH
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
Transketolase_C_1
Fis1_TPR_N
NiFe-hyd_HybE
EDR4-like_1st
UPF0014
Motif
Other DBs
NCBI-ProteinID:
ABF04385
UniProt:
Q0T2T0
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Position
complement(2307056..2308108)
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AA seq
350 aa
AA seq
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MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCPKCQNNSIADSNSMIAT
DLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTVLLWVLPVVAIGIGGWVIY
ARSRRRVRVVPEAFPEQSVPEGKRAGYVVYLPGIVVALIVAGVSYYQTGNYQQVKIWQQA
TAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKNPGDIEGWIMLGRVGMALGNASI
ATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNRLGGELLRQLVRTDHSNIRVLSMYA
FNAFEQQRFGEAVAAWEMMLKLLPANDTRRAVIERSIAQAMQHLSPQESK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttttattgggcgtgctgatgctgatgatctccggctcagcgctggcgaccatc
gacgtgttgcagtttaaagatgaagcacaggaacaacagttccgtcagctcactgaagaa
ctgcgctgcccgaaatgccagaacaacagcattgccgattccaactcgatgattgccacc
gacctgcgtcagaaagtgtatgaactgatgcaggaaggtaaaagtaaaaaagagattgtc
gattatatggtggcgcgttacggcaacttcgtcacttacgatccgccgttaacgccgctg
accgtgctgctgtgggtgctgccagtagtggctattggcattggcggttgggtcatatac
gcccgctcgcggcgtcgggtacgcgtggtgccggaagcgtttcctgaacaaagcgtgccg
gaaggtaagcgtgccggatatgttgtttatctgccgggtattgtggtggcgttaattgtg
gctggcgtcagctactaccagactggcaattatcagcaggtgaaaatctggcagcaggcc
acggcacaggctccggcgttgctggacagggcgctggacccgaaagccgatccgctcaac
gaagaagagatgtcgcgccttgcgctggggatgcgtactcaactgcaaaaaaatccggga
gatatagaaggctggattatgttgggccgcgttggcatggcgctgggtaacgccagtatc
gccaccgatgcatacgctactgcgtatcgcctcgatccgaagaacagcgatgccgcactg
ggatacgctgaagcgttgactcgttcatctgatcccaacgacaaccgcctcggcggtgaa
ctgctacgtcagctggtgagaacggaccatagcaatatccgtgtgctaagcatgtatgcg
tttaatgcctttgagcagcagcgatttggcgaagccgttgccgcgtgggagatgatgttg
aaactcttacctgccaacgatactcgccgtgcggtgattgaacgtagtatcgcgcaggcg
atgcaacatttgtcgccgcaggagagtaaataa
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