Shigella flexneri 8401 (serotype 5b): SFV_2335
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Entry
SFV_2335 CDS
T00377
Symbol
menD
Name
(GenBank) 2-oxoglutarate decarboxylase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00130
Ubiquinone and other terpenoid-quinone biosynthesis
sfv01100
Metabolic pathways
sfv01110
Biosynthesis of secondary metabolites
sfv01240
Biosynthesis of cofactors
Module
sfv_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SFV_2335 (menD)
Enzymes [BR:
sfv01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
SFV_2335 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
ABF04446
UniProt:
Q0T2L9
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Position
complement(2384066..2385925)
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AA seq
619 aa
AA seq
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MLARALSVVPTPSKSGRKSTTKRQGCVLYYKWNSNKSHHYRFISIIYFCSSLYLAAILIP
DKLMSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERG
LGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGAN
QAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGE
MDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKV
ALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQW
QASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAM
QAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASG
IDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSL
LPTPQSERERFYLMPQNVHFEHAAAMFELKYHHPQNWQELETAFADAWRTPTTTVIEMVV
NDTDGAQTLQQLLAQVSHL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgcgggcattgtccgtggttccgaccccgagcaagagtggcaggaaatcgaca
acaaagcggcagggctgcgtactttattacaaatggaatagtaataagtcgcatcattac
cgattcatatcaataatctatttttgtagctccttatacttagccgcaatattgataccg
gacaaactcatgtcagtaagcgcatttaaccgacgctgggcggcggtcattctggaagca
ttaacgcgtcacggcgtcagacacatctgtatcgccccaggctcgcgttctacaccgtta
acgttagcggcggcggagaattccgcattcattcaccacacccatttcgatgagcgtggg
ttggggcatctggcgctggggctggcgaaagtcagcaagcagccggtggcggtgattgtg
acctccggcacggcggtggcaaatctctatccggcactgattgaagccgggttaaccgga
gaaaaactgattctcttaaccgccgatcgcccgccggagctaattgactgcggcgcgaat
caggcaattcgccagccgggaatgttcgcctctcaccccacgcacagtatttcattgccg
cgcccgacccaggatatccccgcacgttggctggtttctaccatcgaccacgctctcggt
acgcttcatgcggggggagtccatatcaactgcccgtttgctgaaccgctgtatggcgaa
atggacgataccgggcttagctggcaacagcgtctgggtgactggtggcaggacgacaaa
ccgtggctgcgtgaagcgcctcgtctggaaagtgaaaaacagcgcgactggttcttctgg
cgacaaaagcgcggcgtggtggttgccgggcgcatgagtgcggaagagggcaaaaaagtt
gccctgtgggcgcaaactcttggctggccgctgattggcgatgtgctgtcacaaaccggg
cagccgctgccgtgtgccgatctttggttaggcaatgccaaagcgaccagcgagctgcag
caggcgcaaattgtggtgcaactgggaagtagcctgacggggaaacggctcctgcaatgg
caggcaagctgtgaaccagaagagtactggattgttgatgacattgaagggcgacttgat
ccggcacaccatcgcggacgtcgcttaattgccaatattgccgactggctggagctgcat
ccggcagaaaaacgccagccctggtgcgttgaaatcccgcgcctggcggaacaggcaatg
caggcggttattgcccgccgtgatgcgtttggcgaagcgcaactggcgcatcgcatcagc
gactatctgcctgaacaggggcaattgtttgttggtaacagcctggtggtacgtctgatt
gatgcgctttcgcaacttccggcaggttacccggtgtacagcaaccgaggggccagcggt
atcgacggactgctttcgaccgccgcaggcgttcagcgggcaagcggcaaaccgacgctg
gcgattgtgggcgatctctccgcactttacgatctcaacgcgctggcgttattgcgtcag
gtttctgcgccgctggtattaattgtggtgaacaacaacggcgggcaaattttctcgctg
ttgccaacgccgcaaagcgagcgtgagcgtttctatctgatgccgcaaaacgtccatttt
gagcacgccgccgcgatgttcgagctgaaatatcatcatccgcaaaactggcaggaactt
gaaacggcatttgccgacgcctggcgcacgccaaccaccacggtgattgaaatggtggtt
aacgacaccgatggtgcgcaaacgctccagcaacttctggcgcaggtaagccatttatga
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