Shigella flexneri 8401 (serotype 5b): SFV_2339
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Entry
SFV_2339 CDS
T00377
Symbol
elaC
Name
(GenBank) conserved hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfv03016
]
SFV_2339 (elaC)
Enzymes [BR:
sfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SFV_2339 (elaC)
Transfer RNA biogenesis [BR:
sfv03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SFV_2339 (elaC)
Prokaryotic type
SFV_2339 (elaC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ABF04450
LinkDB
All DBs
Position
2388067..2389002
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AA seq
311 aa
AA seq
DB search
MKRDELMELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNP
GKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDY
PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPL
FQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEAT
LDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPAT
ELANDFTVFNV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgtgatgaactcatggaattaatttttttaggtacttcagccggtgtgccaacc
cgcacgcgcaatgtcacggcaatattgcttaacctgcaacatccgacccagagcggactt
tggttgtttgactgcggtgaaggcacccagcatcagctactgcataccgcctttaaccct
ggaaaactggacaagatttttatcagtcaccttcatggcgatcatctttttggtttaccc
ggcttgctgtgcagtcgttctatgtcaggcattatccaacccttaacgatttatggtcca
caaggtatccgtgaatttgtggaaaccgcgctgcggattagcggctcatggaccgattat
ccgctggaaattgtcgaaattggcgctggcgaaattctcgatgatggcctgcgcaaagta
accgcttatccgctggaacacccactggaatgttatggctatcgtattgaagaacatgat
aaaccgggtgcattaaatgcccaggcattaaaagctgctggcgtgccgcctggcccactg
tttcaggaattaaaagcgggcaaaacaatcacgctggaagatggaaggcagattaacggc
gcagattacttagctgctccagtgccaggtaaagcgctcgctattttcggcgataccggc
ccctgcgatgccgcacttgacctggctaaaggtgtcgatgtcatggtgcacgaagcgacg
ctggatataaccatggaagccaaagccaatagtcgcggccatagctctacacgccaggct
gcgacactagcccgtgaggctggagtcggcaagctaatcattacccacgtcagctcgcgc
tatgatgacaaaggttgtcaacacctgttacgtgaatgcaggtcaattttcccggcgact
gaactggcgaatgatttcaccgtgtttaacgtttaa
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