Shigella flexneri 8401 (serotype 5b): SFV_2393
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Entry
SFV_2393 CDS
T00377
Name
(GenBank) putative peptidase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfv03016
]
SFV_2393
Enzymes [BR:
sfv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
SFV_2393
Transfer RNA biogenesis [BR:
sfv03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SFV_2393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
ThiI
Motif
Other DBs
NCBI-ProteinID:
ABF04504
UniProt:
Q0T2G1
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All DBs
Position
2443784..2445790
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AA seq
668 aa
AA seq
DB search
MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLF
VIAESGFGTGLNFLTLWKAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL
APWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF
APAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREML
CGVMEQTLPLPCSTPWFNRTGSSKREVAIIGGGIASALLSLALLRRGWQVALYCADEAPA
LGASGNRQGALYPLLSKHDEALNRLFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKS
QHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ
QQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVA
GQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQ
RLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEA
VSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPNPMDASTLAALNPNRLWVRKLL
KGKAVKAG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacactactccatacaacctgccaacctcgaatttaatgctgagggtacacctgtt
tcccgagattttgacgatgtctatttttccaacgataacgggctggaagagacgcgttat
gtttttctgggaggtaaccaattagaggtacgctttcctgagcatccacatcctctgttt
gtgatagcagagagcggcttcggcaccggattaaacttcctgacgctatggaaggcattt
gatcagtttcgcgaagcgcatccgcaagcgcaattacaacgcttacatttcattagtttt
gagaaatttcccctcacccgtgcggatttagccttagcgcatcaacactggccggaactg
gctccgtgggcagaacaacttcaggcgcagtggccaatgcccttgcccggttgccatcgt
ttattgctcgatgaaggccgcgtgacgctggatttatggtttggcgatattaacgaactg
accagccaactggacgattcgctaaatcaaaaagtagatgcctggtttctggacggcttt
gcgccagctaaaaacccggatatgtggacgcaaaatctgtttaacgccatggcaaggttg
gcgcgtccaggcggcacgctggcgacatttacgtctgccggttttgtccgccgcggtttg
caggaagccggattcacgatgcaaaaacgtaagggctttgggcgcaaacgggaaatgctt
tgtggggtgatggaacagacattaccactcccctgctccacgccgtggtttaatcgtacg
ggcagcagcaaacgggaagtagcgattatcggcggtggtattgccagcgcgttgttgtcg
ctggcgttattacggcgcggctggcaggtagcgctttattgcgcggatgaagcccccgcg
ctgggtgcttccggcaatcgccagggggcgctgtatccgttattaagcaaacacgatgag
gcgctaaaccgcttgttctctaatgcgtttacttttgctcgtcggttttacgaccaatta
cccgttaaatttgatcatgactggtgcggcgtcacgcagttaggctgggatgagaaaagc
cagcataaaatcgcacagatgttgtcaatggatttacccgcagaactggctgtagccgtt
gaggcaaatgcggttgaacaaattacgggcgttgcgacaaattgcagcggcattacttat
ccgcaaggtggttggctgtgcccagcagaactgacccgtaatgtgctggaactggcgcaa
cagcagggtttgcagatttattatcaatatcagttacagaatttatcccgtaaggatgac
tgttggttgttgaattttgcaggagatcagcaagcaacacacagcgtagtggtactggcg
aacgggcatcaaatcagccgtttcagccaaacgtcgactctcccggtgtattcggttgcc
gggcaggtcagccatattccgacaacgccggaactggcagagctgaagcaggtgctgtgc
tatgacggttatctcacgccacaaaatccggcgaatcaacatcattgtattggtgccagt
tatcatcgcggcagcgaagatacggcgtacagtgaggacgatcagcagcagaatcgccag
cggttgattgattgtttcccgcaggcacagtgggcaaaagaggttgatgtcagtgataaa
gaggcgcgctgcggtgtgcgttgtgccacccgcgatcatctgccaatggtaggcaatgtt
cccgattatgaggcaacactcgtggaatatgcgtcgttggcggagcaaaaagatgaggcg
gtaagcgcgccggtttttgacgatctctttatgtttgcggctttaggttctcgcggtttg
tgttctgccccgctgtgtgccgagattctggcggcgcagatgagcgacgaaccgaatccg
atggatgccagtacgctggcggcgttaaacccgaatcggttatgggtgcggaaattgttg
aagggtaaagcggttaaggcggggtaa
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