Shigella flexneri 8401 (serotype 5b): SFV_2516
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Entry
SFV_2516 CDS
T00377
Symbol
dapE
Name
(GenBank) N-succinyl-diaminopimelate deacylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00300
Lysine biosynthesis
sfv01100
Metabolic pathways
sfv01120
Microbial metabolism in diverse environments
sfv01230
Biosynthesis of amino acids
Module
sfv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SFV_2516 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfv01002
]
SFV_2516 (dapE)
Enzymes [BR:
sfv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SFV_2516 (dapE)
Peptidases and inhibitors [BR:
sfv01002
]
Metallo peptidases
Family M20
SFV_2516 (dapE)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Peptidase_M42
Motif
Other DBs
NCBI-ProteinID:
ABF04619
UniProt:
Q0T246
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All DBs
Position
2575479..2576606
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AA seq
375 aa
AA seq
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MSCPVIELTQQLIRRPSLSPYDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRGQGET
LAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPN
HTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGS
LTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGT
GSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKL
VDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQ
LLARMYQRIMEQLVA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcccggttattgagctgacacaacagcttattcgccgcccttccctgagtcct
tatgacgcaggatgtcaggctttgttgattgaacgtttgcaggcgatcggttttaccgtt
gaacgcatggattttgccgatacgcagaatttttgggcatggcgtgggcaaggtgaaacg
ttagcctttgccgggcataccgacgtggtgccgcctggcgacgccgatcgttggatcaat
ccgccgtttgaacccaccattcgtgacggcatgttattcgggcgcggtgcggcagatatg
aaaggctcgctggcggcgatggtggtagcagcagaacgttttgtcgcacaacatcccaac
catacggggcgactggcatttctgatcacttctgatgaagaagccagtgcccacaacggt
acggtaaaagtcgtcgaggcgttaatggcacgtaatgagcgtctcgattactgcctggtc
ggcgaaccgtcgagtatcgaagtggtaggtgatgtggtgaaaaatggtcgtcgcggatcg
ttaacctgcaacctcaccattcatggcgttcaggggcatgttgcctacccacatctggct
gacaatccggtacatcgcgcagcacctttccttaatgaattagtggctattgagtgggat
cagggcaatgaattcttcccggcgaccagtatgcagattgccaatattcaggcgggaacg
ggcagtaacaatgttattccgggtgaactgtttgtgcagtttaacttccgcttcagcacc
gaactgactgatgagatgatcaaagcgcaggtacttgccctgcttgaaaaacatcaactg
cgctatacggtggattggtggctttccgggcagccatttttgaccgcgcgcggtaaactg
gtggatgcggtcgttaacgcggttgagcactataatgaaattaaaccgcagctactgacc
acaggcggaacgtccgacggtcgctttattgctcgcatgggggcgcaggtggtggaactc
gggccggtcaatgccactattcataaaattaatgaatgtgtgaacgctgccgacctgcag
ctacttgcccgtatgtatcaacgtatcatggaacagctcgtcgcgtga
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